RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 STARD5Q9NSY2 213 aa16.84■□□□□ 0.29
APOBEC3F-203ENST00000476513 CCDC187A0A096LP49 1063 aa16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 K7ERQ8 282 aa16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 MUSKO15146 869 aa16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 RAD51BO15315 384 aa16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 PRNPP04156 253 aa16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 ITGA2BP08514 1039 aa16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 SLC2A3P11169 496 aa16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 MAPK8IP2Q13387 824 aaPredicted RBP16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 AUHQ13825 339 aaKnown RBP16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 PKP1Q13835 747 aa16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 TAF5Q15542 800 aa16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 DENND1BQ6P3S1 775 aa16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 XKR5Q6UX68 686 aa16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 ATG14Q6ZNE5 492 aa16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 ATP11CQ8NB49 1132 aa16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 LMX1AQ8TE12 382 aa16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 CCDC114Q96M63 670 aa16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 SLC17A9Q9BYT1 436 aa16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 FAM204AQ9H8W3 233 aa16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 WDR70Q9NW82 654 aa16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 ARMCX3Q9UH62 379 aaPredicted RBP16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 VANGL2Q9ULK5 521 aa16.83■□□□□ 0.28
APOBEC3F-203ENST00000476513 SYNJ2BP-COX16A0A087WUM0 186 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 FAM237AA0A1B0GTK4 181 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 E5RJQ4 531 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 TPP1O14773 563 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 SMAD6O43541 496 aaKnown RBP16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 SNAP91O60641 907 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 PAK4O96013 591 aaPredicted RBP16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 JUNDP17535 347 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 RRM1P23921 792 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 CCR1P32246 355 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 RABIFP47224 123 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 FMO5P49326 533 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 ARSIQ5FYB1 569 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 TPRG1LQ5T0D9 272 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 KRBA2Q6ZNG9 492 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 USP53Q70EK8 1073 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 GRIN3AQ8TCU5 1115 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 STK32AQ8WU08 396 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 EXTL1Q92935 676 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 PSMB7Q99436 277 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 IL12RB2Q99665 862 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 MUC3BQ9H195 1237 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 THAP9Q9H5L6 903 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 DDIT4Q9NX09 232 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 COX16Q9P0S2 106 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 IPO11Q9UI26 975 aaKnown RBP16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 TBC1D30Q9Y2I9 924 aa16.82■□□□□ 0.28
APOBEC3F-203ENST00000476513 AHCTF1Q8WYP5 2266 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 KIF26BQ2KJY2 2108 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 SPINT1O43278 529 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 SUV39H1O43463 412 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 CLDN11O75508 207 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 GJB6O95452 261 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 ITGB6P18564 788 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 GGCXP38435 758 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 PRCPP42785 496 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 PMS1P54277 932 aaKnown RBP16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 RPS21P63220 83 aaKnown RBP16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 KRT83P78385 493 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 CDK17Q00537 523 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 FKBP3Q00688 224 aaKnown RBP16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 PDE1CQ14123 709 aaPredicted RBP16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 ANKRD40Q6AI12 368 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 KIAA1161Q6NSJ0 714 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 RRAGAQ7L523 313 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 C14orf80Q86SX3 495 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 TMEM110Q86TL2 294 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 SLC35F3Q8IY50 421 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 WDR48Q8TAF3 677 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 MED15Q96RN5 788 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 BOCQ9BWV1 1114 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 METTL14Q9HCE5 456 aaKnown RBP16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 IL36AQ9UHA7 158 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 VPS51Q9UID3 782 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 PCDHGA7Q9Y5G6 932 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 HS3ST4Q9Y661 456 aa16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 TLN1Q9Y490 2541 aaKnown RBP16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 UBR5O95071 2799 aaPredicted RBP16.81■□□□□ 0.28
APOBEC3F-203ENST00000476513 RP1P56715 2156 aa16.8■□□□□ 0.28
APOBEC3F-203ENST00000476513 NOBOXO60393 691 aa16.8■□□□□ 0.28
APOBEC3F-203ENST00000476513 ITGB2P05107 769 aa16.8■□□□□ 0.28
APOBEC3F-203ENST00000476513 SLC5A2P31639 672 aa16.8■□□□□ 0.28
APOBEC3F-203ENST00000476513 RPIAP49247 311 aa16.8■□□□□ 0.28
APOBEC3F-203ENST00000476513 NEK3P51956 506 aa16.8■□□□□ 0.28
APOBEC3F-203ENST00000476513 EIF2B5Q13144 721 aaKnown RBP16.8■□□□□ 0.28
APOBEC3F-203ENST00000476513 SRSF6Q13247 344 aaKnown RBP16.8■□□□□ 0.28
APOBEC3F-203ENST00000476513 SPIDRQ14159 915 aa16.8■□□□□ 0.28
APOBEC3F-203ENST00000476513 TGIF1Q15583 401 aa16.8■□□□□ 0.28
APOBEC3F-203ENST00000476513 ARHGEF19Q8IW93 802 aa16.8■□□□□ 0.28
APOBEC3F-203ENST00000476513 RBFAQ8N0V3 343 aa16.8■□□□□ 0.28
APOBEC3F-203ENST00000476513 DEFB106AQ8N104 65 aa16.8■□□□□ 0.28
APOBEC3F-203ENST00000476513 LMO3Q8TAP4 145 aa16.8■□□□□ 0.28
APOBEC3F-203ENST00000476513 NAT6Q93015 286 aa16.8■□□□□ 0.28
APOBEC3F-203ENST00000476513 SGF29Q96ES7 293 aa16.8■□□□□ 0.28
APOBEC3F-203ENST00000476513 LIN37Q96GY3 246 aaPredicted RBP16.8■□□□□ 0.28
APOBEC3F-203ENST00000476513 PPP1R16AQ96I34 528 aa16.8■□□□□ 0.28
APOBEC3F-203ENST00000476513 FEM1CQ96JP0 617 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms