RNA–Protein interactions for RNA: ENST00000475779.1

SMO-203, Transcript of smoothened, frizzled class receptor, humanhuman

TSL 3

Gene SMO, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMO-203ENST00000475779 TRIM16O95361 564 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 IPO7O95373 1038 aaKnown RBP12.35□□□□□ -0.43
SMO-203ENST00000475779 PRNPP04156 253 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 RHOQP17081 205 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 ADRA1BP35368 520 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 RECQLP46063 649 aaPredicted RBP12.35□□□□□ -0.43
SMO-203ENST00000475779 NUMBP49757 651 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 CCT8P50990 548 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 ZNF143P52747 638 aaPredicted RBP12.35□□□□□ -0.43
SMO-203ENST00000475779 GEMIN4P57678 1058 aaKnown RBP12.35□□□□□ -0.43
SMO-203ENST00000475779 SIM1P81133 766 aaPredicted RBP12.35□□□□□ -0.43
SMO-203ENST00000475779 BNC1Q01954 994 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 GNA12Q03113 381 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 INAVAQ3KP66 663 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 EFHC2Q5JST6 749 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 GLRX5Q86SX6 157 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 TRIM69Q86WT6 500 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 PCDH20Q8N6Y1 951 aaKnown RBP12.35□□□□□ -0.43
SMO-203ENST00000475779 OR7D4Q8NG98 312 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 OR2A12Q8NGT7 310 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 PIP4K2CQ8TBX8 421 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 SKA1Q96BD8 255 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 TBC1D31Q96DN5 1066 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 PPP1R16AQ96I34 528 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 VCPIP1Q96JH7 1222 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 SLC6A18Q96N87 628 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 MCEEQ96PE7 176 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 KCNF1Q9H3M0 494 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 GAREM1Q9H706 876 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 PREBQ9HCU5 417 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 ATP13A1Q9HD20 1204 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 TM7SF3Q9NS93 570 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 OR12D3Q9UGF7 316 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 PPM1HQ9ULR3 514 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 DMTF1Q9Y222 760 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 SLCO1B1Q9Y6L6 691 aa12.35□□□□□ -0.43
SMO-203ENST00000475779 KMT2BQ9UMN6 2715 aaPredicted RBP12.35□□□□□ -0.43
SMO-203ENST00000475779 CBX4O00257 560 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 YKT6O15498 198 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 CCP110O43303 1012 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 DFNA5O60443 496 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 SRGAP2O75044 1071 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 ZMPSTE24O75844 475 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 LRIG2O94898 1065 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 RRM1P23921 792 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 HTR7P34969 479 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 RFC1P35251 1148 aaPredicted RBP12.34□□□□□ -0.43
SMO-203ENST00000475779 C21orf59P57076 290 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 SLC20A2Q08357 652 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 CCDC15Q0P6D6 951 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 FOXC1Q12948 553 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 ZNF423Q2M1K9 1284 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 KIF19Q2TAC6 998 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 HLA-BQ31612 363 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 SLC45A4Q5BKX6 768 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 PPP1R15BQ5SWA1 713 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 NAPEPLDQ6IQ20 393 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 NLRP14Q86W24 1093 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 CCDC185Q8N715 623 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 OR14C36Q8NHC7 312 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 ZNF830Q96NB3 372 aaPredicted RBP12.34□□□□□ -0.43
SMO-203ENST00000475779 CNPY3Q9BT09 278 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 SARDHQ9UL12 918 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 WASF3Q9UPY6 502 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 ANKRD6Q9Y2G4 727 aa12.34□□□□□ -0.43
SMO-203ENST00000475779 MAP1BP46821 2468 aaKnown RBP12.34□□□□□ -0.43
SMO-203ENST00000475779 TPRP12270 2363 aaKnown RBP12.34□□□□□ -0.43
SMO-203ENST00000475779 USP24Q9UPU5 2620 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 ZSCAN5CA6NGD5 496 aaPredicted RBP12.33□□□□□ -0.44
SMO-203ENST00000475779 EIF3CLB5ME19 914 aaKnown RBP12.33□□□□□ -0.44
SMO-203ENST00000475779 DDX3XO00571 662 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMO-203ENST00000475779 BNIP3LO60238 219 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 SH3BP5O60239 455 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 PCDHGA12O60330 932 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 RAMP2O60895 175 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 NDUFA10O95299 355 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 GJB6O95452 261 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 MT-CO1P00395 513 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 L1CAMP32004 1257 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 CHRNA3P32297 505 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 CTSKP43235 329 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 CSNK1EP49674 416 aaKnown RBP12.33□□□□□ -0.44
SMO-203ENST00000475779 METAP1P53582 386 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 PPP2CBP62714 309 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 PPP2CAP67775 309 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 ARF5P84085 180 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 OVGP1Q12889 678 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 SPA17Q15506 151 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 SLC18A3Q16572 532 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 ASTE1Q2TB18 679 aaPredicted RBP12.33□□□□□ -0.44
SMO-203ENST00000475779 HS1BP3Q53T59 392 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 PIP5KL1Q5T9C9 394 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 ACAD10Q6JQN1 1059 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 RWDD4Q6NW29 188 aaKnown RBP12.33□□□□□ -0.44
SMO-203ENST00000475779 NEK5Q6P3R8 708 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 LAYNQ6UX15 382 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 RAD9BQ6WBX8 426 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 SLFN11Q7Z7L1 901 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 IQCHQ86VS3 1027 aa12.33□□□□□ -0.44
SMO-203ENST00000475779 ZSCAN30Q86W11 494 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms