RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 ZNF75DP51815 510 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 GSCP56915 257 aaPredicted RBP15.47■□□□□ 0.07
VARS-223ENST00000474643 CNTN1Q12860 1018 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 C15orf59Q2T9L4 293 aaPredicted RBP15.47■□□□□ 0.07
VARS-223ENST00000474643 HS1BP3Q53T59 392 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 NAPEPLDQ6IQ20 393 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 TRNP1Q6NT89 227 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 SETD3Q86TU7 594 aaPredicted RBP15.47■□□□□ 0.07
VARS-223ENST00000474643 FAM131BQ86XD5 332 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 ZNF354CQ86Y25 554 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 GALNT15Q8N3T1 639 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 OR8K1Q8NGG5 319 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 GRIN3AQ8TCU5 1115 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 FRS2Q8WU20 508 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 ZNF653Q96CK0 615 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 TRIM11Q96F44 468 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 PGAP3Q96FM1 320 aaPredicted RBP15.47■□□□□ 0.07
VARS-223ENST00000474643 PPP1R16AQ96I34 528 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 VCPIP1Q96JH7 1222 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 SYT11Q9BT88 431 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 KDM4CQ9H3R0 1056 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 PARVAQ9NVD7 372 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 MPP6Q9NZW5 540 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 MYO1AQ9UBC5 1043 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 BTBD3Q9Y2F9 522 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 TBC1D30Q9Y2I9 924 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 SNX10Q9Y5X0 201 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 IGF2RP11717 2491 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 A0A1B0GTQ1 180 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 C2CD4BA6NLJ0 364 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 PLK4O00444 970 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 MCF2LO15068 1137 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 ATMINO43313 823 aaPredicted RBP15.46■□□□□ 0.07
VARS-223ENST00000474643 PCDHGA12O60330 932 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 PRNPP04156 253 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 PLEKP08567 350 aaPredicted RBP15.46■□□□□ 0.07
VARS-223ENST00000474643 ATXN1LP0C7T5 689 aaKnown RBP15.46■□□□□ 0.07
VARS-223ENST00000474643 SRCP12931 536 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 VASPP50552 380 aaPredicted RBP15.46■□□□□ 0.07
VARS-223ENST00000474643 CLCN6P51797 869 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 PPP2CBP62714 309 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 PPP2CAP67775 309 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 CCDC14Q49A88 953 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 ALFQ53S48 1182 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 PRAMEF14Q5SWL7 426 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 OTUD1Q5VV17 481 aaPredicted RBP15.46■□□□□ 0.07
VARS-223ENST00000474643 HGSNATQ68CP4 663 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 RETSATQ6NUM9 610 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 RWDD4Q6NW29 188 aaKnown RBP15.46■□□□□ 0.07
VARS-223ENST00000474643 WDR59Q6PJI9 974 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 SLCO6A1Q86UG4 719 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 DNAAF5Q86Y56 855 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 GATAD2AQ86YP4 633 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 DRC7Q8IY82 874 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 DCAF4L2Q8NA75 395 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 FAM172AQ8WUF8 416 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 NT5C3BQ969T7 300 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 ZYG11BQ9C0D3 744 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 CCDC86Q9H6F5 360 aaKnown RBP15.46■□□□□ 0.07
VARS-223ENST00000474643 ATP13A1Q9HD20 1204 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 CNOT8Q9UFF9 292 aaKnown RBP15.46■□□□□ 0.07
VARS-223ENST00000474643 VPS51Q9UID3 782 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 DMTF1Q9Y222 760 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 HS3ST2Q9Y278 367 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 WDFY3Q8IZQ1 3526 aa15.46■□□□□ 0.07
VARS-223ENST00000474643 TLR4O00206 839 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 PLRG1O43660 514 aaKnown RBP15.45■□□□□ 0.06
VARS-223ENST00000474643 SNAP91O60641 907 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 PCDH8O95206 1070 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 LDOC1O95751 146 aaPredicted RBP15.45■□□□□ 0.06
VARS-223ENST00000474643 MYBL1P10243 752 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 CHRNA3P32297 505 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 DRD3P35462 400 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 PTPN9P43378 593 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 ADKP55263 362 aaKnown RBP15.45■□□□□ 0.06
VARS-223ENST00000474643 KCNT1Q5JUK3 1230 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 SCYL2Q6P3W7 929 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 LINGO4Q6UY18 593 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 STRADAQ7RTN6 431 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 CNGA4Q8IV77 575 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 RYBPQ8N488 228 aaPredicted RBP15.45■□□□□ 0.06
VARS-223ENST00000474643 OR52K2Q8NGK3 314 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 C1orf74Q96LT6 269 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 HAPLN3Q96S86 360 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 ORAI3Q9BRQ5 295 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 TNKS2Q9H2K2 1166 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 PREBQ9HCU5 417 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 IL36AQ9UHA7 158 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 SARDHQ9UL12 918 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 PPM1HQ9ULR3 514 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 HPCAL4Q9UM19 191 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 SCINQ9Y6U3 715 aa15.45■□□□□ 0.06
VARS-223ENST00000474643 NYNRINQ9P2P1 1898 aaKnown RBP15.45■□□□□ 0.06
VARS-223ENST00000474643 PLXNA2O75051 1894 aa15.44■□□□□ 0.06
VARS-223ENST00000474643 ILVBLA1L0T0 632 aa15.44■□□□□ 0.06
VARS-223ENST00000474643 SRRM3A6NNA2 597 aaPredicted RBP15.44■□□□□ 0.06
VARS-223ENST00000474643 AKR1B15C9JRZ8 316 aaPredicted RBP15.44■□□□□ 0.06
VARS-223ENST00000474643 PRAMEF26H0Y7S4 382 aa15.44■□□□□ 0.06
VARS-223ENST00000474643 MFAP3LO75121 409 aa15.44■□□□□ 0.06
VARS-223ENST00000474643 ENDOD1O94919 500 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms