RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 PGGT1BP53609 377 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 POLGP54098 1239 aaPredicted RBP3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 ZBTB16Q05516 673 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 FOXD4Q12950 439 aaPredicted RBP3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 TRPC3Q13507 836 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 PTGR1Q14914 329 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 PRTGQ2VWP7 1150 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 LRRC24Q50LG9 513 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 WDR45BQ5MNZ6 344 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 ENTPD8Q5MY95 495 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 NRACQ8N912 160 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 TNIP2Q8NFZ5 429 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 LINS1Q8NG48 757 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 TMEM174Q8WUU8 243 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 NSMCE1Q8WV22 266 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 RILPL2Q969X0 211 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 EME1Q96AY2 570 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 TAOK3Q9H2K8 898 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 STN1Q9H668 368 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 AAMDCQ9H7C9 122 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 CATSPERBQ9H7T0 1116 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 RMI1Q9H9A7 625 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 KRCC1Q9NPI7 259 aaPredicted RBP3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 IFT80Q9P2H3 777 aaPredicted RBP3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 TBC1D14Q9P2M4 693 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 COG5Q9UP83 839 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 CNPY2Q9Y2B0 182 aa3.54□□□□□ -1.84
ECHDC1-213ENST00000474240 TMEM272A0A1B0GTI8 110 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 SH2D7A6NKC9 451 aaPredicted RBP3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 B4DGG1 531 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 H3BNX3 289 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 NCAM2O15394 837 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 KLK10O43240 276 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 IL1AP01583 271 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 CPA1P15085 419 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 AVPR2P30518 371 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 HNF1BP35680 557 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 MTNR1AP48039 350 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 ENTPD1P49961 510 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 IL13RA2Q14627 380 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 RETSATQ6NUM9 610 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 SERPINA11Q86U17 422 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 GHDCQ8N2G8 530 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 TMEM217Q8N7C4 229 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 RFWD2Q8NHY2 731 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 GABPB2Q8TAK5 448 aaPredicted RBP3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 TMEM170AQ8WVE7 144 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 SLC25A28Q96A46 364 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 MSI2Q96DH6 328 aaKnown RBP3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 RNFT2Q96EX2 444 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 HERC2P3Q9BVR0 1158 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 FRMD8Q9BZ67 464 aaPredicted RBP3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 B3GNT4Q9C0J1 378 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 FAM234AQ9H0X4 552 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 ACAD9Q9H845 621 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 ZNF304Q9HCX3 659 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 ZBTB40Q9NUA8 1239 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 PPP1R14DQ9NXH3 145 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 SEL1LQ9UBV2 794 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 CNOT7Q9UIV1 285 aaKnown RBP3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 TBX20Q9UMR3 447 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 ICKQ9UPZ9 632 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 RAP2CQ9Y3L5 183 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 SQORQ9Y6N5 450 aa3.53□□□□□ -1.84
ECHDC1-213ENST00000474240 C17orf113A0A1B0GUU1 675 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 GAGE10A6NGK3 116 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 A6NNC1 897 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 PRR23D1E9PI22 279 aaPredicted RBP3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 HOXC11O43248 304 aaPredicted RBP3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 TOMM40O96008 361 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 SERPINC1P01008 464 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 PRR23D2P0DMB1 279 aaPredicted RBP3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 CHRNB1P11230 501 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 LYL1P12980 280 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 TNFSF8P32971 234 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 PGM1P36871 562 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 MAPK9P45984 424 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 FOXG1P55316 489 aaPredicted RBP3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 ZP1P60852 638 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 YWHAZP63104 245 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 RPE65Q16518 533 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 AP5B1Q2VPB7 878 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 DCAF6Q58WW2 860 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 OTUD1Q5VV17 481 aaPredicted RBP3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 HEPHL1Q6MZM0 1159 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 HMBOX1Q6NT76 420 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 IL20RBQ6UXL0 311 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 RNF144BQ7Z419 303 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 PATL1Q86TB9 770 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 SUGP1Q8IWZ8 645 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 FAM217AQ8IXS0 508 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 TMEM199Q8N511 208 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 ZNF548Q8NEK5 533 aaPredicted RBP3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 ZCCHC10Q8TBK6 192 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 RAB40AQ8WXH6 277 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 HSPH1Q92598 858 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 CNOT9Q92600 299 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 SF3B5Q9BWJ5 86 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 RBM38Q9H0Z9 239 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 KLHL31Q9H511 634 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms