RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 YBEYP58557 167 aaPredicted RBP19.31■□□□□ 0.68
PTCD3-210ENST00000473829 IRX4P78413 519 aa19.31■□□□□ 0.68
PTCD3-210ENST00000473829 SLC20A2Q08357 652 aa19.31■□□□□ 0.68
PTCD3-210ENST00000473829 SERINC3Q13530 473 aa19.31■□□□□ 0.68
PTCD3-210ENST00000473829 DPYSQ14117 519 aa19.31■□□□□ 0.68
PTCD3-210ENST00000473829 RSPO4Q2I0M5 234 aaPredicted RBP19.31■□□□□ 0.68
PTCD3-210ENST00000473829 TRIM61Q5EBN2 209 aa19.31■□□□□ 0.68
PTCD3-210ENST00000473829 DPY19L3Q6ZPD9 716 aa19.31■□□□□ 0.68
PTCD3-210ENST00000473829 DSG4Q86SJ6 1040 aa19.31■□□□□ 0.68
PTCD3-210ENST00000473829 NPWQ8N729 165 aa19.31■□□□□ 0.68
PTCD3-210ENST00000473829 DNASE2BQ8WZ79 361 aa19.31■□□□□ 0.68
PTCD3-210ENST00000473829 FOXJ1Q92949 421 aa19.31■□□□□ 0.68
PTCD3-210ENST00000473829 FAM131CQ96AQ9 280 aa19.31■□□□□ 0.68
PTCD3-210ENST00000473829 OMDQ99983 421 aa19.31■□□□□ 0.68
PTCD3-210ENST00000473829 CEP44Q9C0F1 390 aa19.31■□□□□ 0.68
PTCD3-210ENST00000473829 SGK2Q9HBY8 427 aa19.31■□□□□ 0.68
PTCD3-210ENST00000473829 FZD4Q9ULV1 537 aa19.31■□□□□ 0.68
PTCD3-210ENST00000473829 NCKAP1Q9Y2A7 1128 aa19.31■□□□□ 0.68
PTCD3-210ENST00000473829 PLXNA2O75051 1894 aa19.31■□□□□ 0.68
PTCD3-210ENST00000473829 CXorf51AA0A1B0GTR3 108 aa19.3■□□□□ 0.68
PTCD3-210ENST00000473829 C10orf142B7Z368 130 aa19.3■□□□□ 0.68
PTCD3-210ENST00000473829 KHNYNO15037 678 aaKnown RBP19.3■□□□□ 0.68
PTCD3-210ENST00000473829 CHRNA3P32297 505 aa19.3■□□□□ 0.68
PTCD3-210ENST00000473829 HOXD12P35452 270 aa19.3■□□□□ 0.68
PTCD3-210ENST00000473829 TAS2R40P59535 323 aa19.3■□□□□ 0.68
PTCD3-210ENST00000473829 PARP15Q460N3 678 aa19.3■□□□□ 0.68
PTCD3-210ENST00000473829 BOLA3Q53S33 107 aa19.3■□□□□ 0.68
PTCD3-210ENST00000473829 AFMIDQ63HM1 303 aa19.3■□□□□ 0.68
PTCD3-210ENST00000473829 ZNF354CQ86Y25 554 aa19.3■□□□□ 0.68
PTCD3-210ENST00000473829 ARHGAP12Q8IWW6 846 aa19.3■□□□□ 0.68
PTCD3-210ENST00000473829 RGL4Q8IZJ4 473 aa19.3■□□□□ 0.68
PTCD3-210ENST00000473829 PCDH20Q8N6Y1 951 aaKnown RBP19.3■□□□□ 0.68
PTCD3-210ENST00000473829 GRIN3AQ8TCU5 1115 aa19.3■□□□□ 0.68
PTCD3-210ENST00000473829 TEKT4Q8WW24 435 aa19.3■□□□□ 0.68
PTCD3-210ENST00000473829 VOPP1Q96AW1 172 aa19.3■□□□□ 0.68
PTCD3-210ENST00000473829 EDEM2Q9BV94 578 aa19.3■□□□□ 0.68
PTCD3-210ENST00000473829 TM6SF2Q9BZW4 377 aa19.3■□□□□ 0.68
PTCD3-210ENST00000473829 SLC39A8Q9C0K1 460 aa19.3■□□□□ 0.68
PTCD3-210ENST00000473829 PCED1AQ9H1Q7 454 aa19.3■□□□□ 0.68
PTCD3-210ENST00000473829 PCDH18Q9HCL0 1135 aa19.3■□□□□ 0.68
PTCD3-210ENST00000473829 EVLQ9UI08 416 aaPredicted RBP19.3■□□□□ 0.68
PTCD3-210ENST00000473829 HPCAL4Q9UM19 191 aa19.3■□□□□ 0.68
PTCD3-210ENST00000473829 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.3■□□□□ 0.68
PTCD3-210ENST00000473829 WASF2Q9Y6W5 498 aa19.3■□□□□ 0.68
PTCD3-210ENST00000473829 FAM47DPA6NHR8 397 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 PRR5-ARHGAP8B1AHC4 643 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 C1QTNF3-AMACRE9PGA6 284 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 FOXD2O60548 495 aaPredicted RBP19.29■□□□□ 0.68
PTCD3-210ENST00000473829 IGHV4-34P06331 123 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 DPP6P42658 865 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 HCAR3P49019 387 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 DNA2P51530 1060 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 NDST2P52849 883 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 ADPRHP54922 357 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 ARHGAP8P85298 464 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 CNTN1Q12860 1018 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 WDR45BQ5MNZ6 344 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 SYCP2LQ5T4T6 812 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 AGBL4Q5VU57 503 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 SLC23A3Q6PIS1 610 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 NCEH1Q6PIU2 408 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 POLNQ7Z5Q5 900 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 TP53INP2Q8IXH6 220 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 SLC35G2Q8TBE7 412 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 TSC1Q92574 1164 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 ARRDC3Q96B67 414 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 BIRC7Q96CA5 298 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 CCDC114Q96M63 670 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 CSPG4P5Q96PW8 444 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 PDFQ9HBH1 243 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 ETNK2Q9NVF9 386 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 DLL3Q9NYJ7 618 aa19.29■□□□□ 0.68
PTCD3-210ENST00000473829 EIF2B4Q9UI10 523 aaKnown RBP19.29■□□□□ 0.68
PTCD3-210ENST00000473829 TMEM110-MUSTN1A8MSY1 372 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 H3BRJ5 948 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 J3KR12 359 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 DAPK3O43293 454 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 BUB1O43683 1085 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 TMCC1O94876 653 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 FSBPO95073 299 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 CFIP05156 583 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 CD48P09326 243 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 AMPD1P23109 780 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 GKP32189 559 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 GJC1P36383 396 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 SSR1P43307 286 aaKnown RBP19.28■□□□□ 0.68
PTCD3-210ENST00000473829 ID4P47928 161 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 CCNHP51946 323 aaPredicted RBP19.28■□□□□ 0.68
PTCD3-210ENST00000473829 ZNF135P52742 658 aaPredicted RBP19.28■□□□□ 0.68
PTCD3-210ENST00000473829 GEMIN4P57678 1058 aaKnown RBP19.28■□□□□ 0.68
PTCD3-210ENST00000473829 DUOXA1Q1HG43 343 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 ATP13A4Q4VNC1 1196 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 CARD16Q5EG05 197 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 ARSIQ5FYB1 569 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 FAM46CQ5VWP2 391 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 KIAA0895LQ68EN5 471 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.28■□□□□ 0.68
PTCD3-210ENST00000473829 ZCCHC9Q8N567 271 aaKnown RBP19.28■□□□□ 0.68
PTCD3-210ENST00000473829 OR6K2Q8NGY2 324 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 C1orf216Q8TAB5 229 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms