RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 ACADMP11310 421 aa21.17■□□□□ 0.98
TOP3A-204ENST00000472959 CDKN2BP42772 138 aa21.17■□□□□ 0.98
TOP3A-204ENST00000472959 MARCKSL1P49006 195 aa21.17■□□□□ 0.98
TOP3A-204ENST00000472959 COPS2P61201 443 aa21.17■□□□□ 0.98
TOP3A-204ENST00000472959 SFSWAPQ12872 951 aaKnown RBP21.17■□□□□ 0.98
TOP3A-204ENST00000472959 TFDP2Q14188 446 aa21.17■□□□□ 0.98
TOP3A-204ENST00000472959 RFTN1Q14699 578 aaPredicted RBP21.17■□□□□ 0.98
TOP3A-204ENST00000472959 SLC9A4Q6AI14 798 aa21.17■□□□□ 0.98
TOP3A-204ENST00000472959 MFSD7Q6UXD7 560 aa21.17■□□□□ 0.98
TOP3A-204ENST00000472959 SPOCD1Q6ZMY3 1216 aa21.17■□□□□ 0.98
TOP3A-204ENST00000472959 UBL4BQ8N7F7 174 aa21.17■□□□□ 0.98
TOP3A-204ENST00000472959 OR2A12Q8NGT7 310 aa21.17■□□□□ 0.98
TOP3A-204ENST00000472959 ZNF599Q96NL3 588 aa21.17■□□□□ 0.98
TOP3A-204ENST00000472959 KCNF1Q9H3M0 494 aa21.17■□□□□ 0.98
TOP3A-204ENST00000472959 LZTFL1Q9NQ48 299 aa21.17■□□□□ 0.98
TOP3A-204ENST00000472959 ITM2CQ9NQX7 267 aa21.17■□□□□ 0.98
TOP3A-204ENST00000472959 FCF1Q9Y324 198 aaKnown RBP21.17■□□□□ 0.98
TOP3A-204ENST00000472959 CAPN6Q9Y6Q1 641 aa21.17■□□□□ 0.98
TOP3A-204ENST00000472959 APOL1O14791 398 aa21.16■□□□□ 0.98
TOP3A-204ENST00000472959 TMCC1O94876 653 aa21.16■□□□□ 0.98
TOP3A-204ENST00000472959 DNTTP04053 509 aa21.16■□□□□ 0.98
TOP3A-204ENST00000472959 MX2P20592 715 aa21.16■□□□□ 0.98
TOP3A-204ENST00000472959 P2RY2P41231 377 aa21.16■□□□□ 0.98
TOP3A-204ENST00000472959 PEX5P50542 639 aa21.16■□□□□ 0.98
TOP3A-204ENST00000472959 RWDD2BP57060 319 aa21.16■□□□□ 0.98
TOP3A-204ENST00000472959 NHLH1Q02575 133 aa21.16■□□□□ 0.98
TOP3A-204ENST00000472959 GALNT2Q10471 571 aa21.16■□□□□ 0.98
TOP3A-204ENST00000472959 MAP7D1Q3KQU3 841 aa21.16■□□□□ 0.98
TOP3A-204ENST00000472959 CARD16Q5EG05 197 aa21.16■□□□□ 0.98
TOP3A-204ENST00000472959 TFDP3Q5H9I0 405 aa21.16■□□□□ 0.98
TOP3A-204ENST00000472959 LEKR1Q6ZMV7 388 aa21.16■□□□□ 0.98
TOP3A-204ENST00000472959 TP53INP2Q8IXH6 220 aa21.16■□□□□ 0.98
TOP3A-204ENST00000472959 ATPAF2Q8N5M1 289 aa21.16■□□□□ 0.98
TOP3A-204ENST00000472959 NETO2Q8NC67 525 aa21.16■□□□□ 0.98
TOP3A-204ENST00000472959 ZNF830Q96NB3 372 aaPredicted RBP21.16■□□□□ 0.98
TOP3A-204ENST00000472959 TNKS2Q9H2K2 1166 aa21.16■□□□□ 0.98
TOP3A-204ENST00000472959 USP36Q9P275 1121 aaKnown RBP21.16■□□□□ 0.98
TOP3A-204ENST00000472959 ACTL7AQ9Y615 435 aa21.16■□□□□ 0.98
TOP3A-204ENST00000472959 CHD5Q8TDI0 1954 aa21.16■□□□□ 0.98
TOP3A-204ENST00000472959 MFSD11O43934 449 aa21.15■□□□□ 0.98
TOP3A-204ENST00000472959 BNIP3LO60238 219 aa21.15■□□□□ 0.98
TOP3A-204ENST00000472959 ADH1BP00325 375 aa21.15■□□□□ 0.98
TOP3A-204ENST00000472959 GSRP00390 522 aa21.15■□□□□ 0.98
TOP3A-204ENST00000472959 IGLV3-19P01714 112 aa21.15■□□□□ 0.98
TOP3A-204ENST00000472959 OXTRP30559 389 aa21.15■□□□□ 0.98
TOP3A-204ENST00000472959 CETN2P41208 172 aa21.15■□□□□ 0.98
TOP3A-204ENST00000472959 DNA2P51530 1060 aa21.15■□□□□ 0.98
TOP3A-204ENST00000472959 SNRPD1P62314 119 aaKnown RBP21.15■□□□□ 0.98
TOP3A-204ENST00000472959 CST6Q15828 149 aa21.15■□□□□ 0.98
TOP3A-204ENST00000472959 PPP2R5EQ16537 467 aa21.15■□□□□ 0.98
TOP3A-204ENST00000472959 TTC31Q49AM3 519 aaPredicted RBP21.15■□□□□ 0.98
TOP3A-204ENST00000472959 TMCO4Q5TGY1 634 aa21.15■□□□□ 0.98
TOP3A-204ENST00000472959 FAM46CQ5VWP2 391 aa21.15■□□□□ 0.98
TOP3A-204ENST00000472959 ARHGAP36Q6ZRI8 547 aa21.15■□□□□ 0.98
TOP3A-204ENST00000472959 CEP68Q76N32 757 aa21.15■□□□□ 0.98
TOP3A-204ENST00000472959 RFX6Q8HWS3 928 aa21.15■□□□□ 0.98
TOP3A-204ENST00000472959 MMAAQ8IVH4 418 aaKnown RBP21.15■□□□□ 0.98
TOP3A-204ENST00000472959 CCDC50Q8IVM0 306 aa21.15■□□□□ 0.98
TOP3A-204ENST00000472959 ALS2CR12Q96Q35 445 aa21.15■□□□□ 0.98
TOP3A-204ENST00000472959 EPC1Q9H2F5 836 aa21.15■□□□□ 0.98
TOP3A-204ENST00000472959 FAM86C1Q9NVL1 165 aa21.15■□□□□ 0.98
TOP3A-204ENST00000472959 PPM1HQ9ULR3 514 aa21.15■□□□□ 0.98
TOP3A-204ENST00000472959 CKAP5Q14008 2032 aa21.15■□□□□ 0.98
TOP3A-204ENST00000472959 ZSCAN12O43309 604 aa21.14■□□□□ 0.97
TOP3A-204ENST00000472959 MAFKO60675 156 aa21.14■□□□□ 0.97
TOP3A-204ENST00000472959 FTCDO95954 541 aa21.14■□□□□ 0.97
TOP3A-204ENST00000472959 C5AR1P21730 350 aa21.14■□□□□ 0.97
TOP3A-204ENST00000472959 CHRNA3P32297 505 aa21.14■□□□□ 0.97
TOP3A-204ENST00000472959 GARSP41250 739 aaKnown RBP21.14■□□□□ 0.97
TOP3A-204ENST00000472959 TPMTP51580 245 aa21.14■□□□□ 0.97
TOP3A-204ENST00000472959 GBE1Q04446 702 aa21.14■□□□□ 0.97
TOP3A-204ENST00000472959 SIM2Q14190 667 aaPredicted RBP21.14■□□□□ 0.97
TOP3A-204ENST00000472959 CYTH1Q15438 398 aa21.14■□□□□ 0.97
TOP3A-204ENST00000472959 DPY19L3Q6ZPD9 716 aa21.14■□□□□ 0.97
TOP3A-204ENST00000472959 PLD5Q8N7P1 536 aa21.14■□□□□ 0.97
TOP3A-204ENST00000472959 TMIEQ8NEW7 156 aa21.14■□□□□ 0.97
TOP3A-204ENST00000472959 OR2AP1Q8NGE2 309 aa21.14■□□□□ 0.97
TOP3A-204ENST00000472959 NSMCE1Q8WV22 266 aa21.14■□□□□ 0.97
TOP3A-204ENST00000472959 RLN3Q8WXF3 142 aa21.14■□□□□ 0.97
TOP3A-204ENST00000472959 TSGA13Q96PP4 275 aa21.14■□□□□ 0.97
TOP3A-204ENST00000472959 PABPC3Q9H361 631 aaKnown RBP21.14■□□□□ 0.97
TOP3A-204ENST00000472959 DTLQ9NZJ0 730 aa21.14■□□□□ 0.97
TOP3A-204ENST00000472959 HECAQ9UBI9 543 aaPredicted RBP21.14■□□□□ 0.97
TOP3A-204ENST00000472959 EFR3BQ9Y2G0 817 aa21.14■□□□□ 0.97
TOP3A-204ENST00000472959 WDFY4Q6ZS81 3184 aa21.14■□□□□ 0.97
TOP3A-204ENST00000472959 hCG_1818297A0A087WSY0 165 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 PROB1E7EW31 1015 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 C1QTNF3-AMACRE9PGA6 284 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 POP4O95707 220 aaKnown RBP21.13■□□□□ 0.97
TOP3A-204ENST00000472959 IL1BP01584 269 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 PRNPP04156 253 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 SLC8A1P32418 973 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 PSMD8P48556 350 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 NR2C2P49116 596 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 RHOAP61586 193 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 SRSF5Q13243 272 aaKnown RBP21.13■□□□□ 0.97
TOP3A-204ENST00000472959 SLC36A4Q6YBV0 504 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 USP30Q70CQ3 517 aa21.13■□□□□ 0.97
TOP3A-204ENST00000472959 BZW1Q7L1Q6 419 aaKnown RBP21.13■□□□□ 0.97
TOP3A-204ENST00000472959 CACUL1Q86Y37 369 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms