RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 CCDC114Q96M63 670 aa19.46■□□□□ 0.71
SORT1-203ENST00000471996 TRIM62Q9BVG3 475 aa19.46■□□□□ 0.71
SORT1-203ENST00000471996 SRRTQ9BXP5 876 aaKnown RBP19.46■□□□□ 0.71
SORT1-203ENST00000471996 HDAC8Q9BY41 377 aa19.46■□□□□ 0.71
SORT1-203ENST00000471996 FOXD4L1Q9NU39 408 aa19.46■□□□□ 0.71
SORT1-203ENST00000471996 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.46■□□□□ 0.71
SORT1-203ENST00000471996 IPO11Q9UI26 975 aaKnown RBP19.46■□□□□ 0.71
SORT1-203ENST00000471996 VPS28Q9UK41 221 aa19.46■□□□□ 0.71
SORT1-203ENST00000471996 HS3ST2Q9Y278 367 aa19.46■□□□□ 0.71
SORT1-203ENST00000471996 RNF225M0QZC1 329 aaPredicted RBP19.45■□□□□ 0.7
SORT1-203ENST00000471996 RNF103O00237 685 aa19.45■□□□□ 0.7
SORT1-203ENST00000471996 NTN3O00634 580 aaPredicted RBP19.45■□□□□ 0.7
SORT1-203ENST00000471996 RAD51BO15315 384 aa19.45■□□□□ 0.7
SORT1-203ENST00000471996 PPFIA2O75334 1257 aa19.45■□□□□ 0.7
SORT1-203ENST00000471996 TRUB2O95900 331 aaKnown RBP19.45■□□□□ 0.7
SORT1-203ENST00000471996 PRNPP04156 253 aa19.45■□□□□ 0.7
SORT1-203ENST00000471996 SRCP12931 536 aa19.45■□□□□ 0.7
SORT1-203ENST00000471996 BRD2P25440 801 aaKnown RBP19.45■□□□□ 0.7
SORT1-203ENST00000471996 UGT1A5P35504 534 aa19.45■□□□□ 0.7
SORT1-203ENST00000471996 RPS21P63220 83 aaKnown RBP19.45■□□□□ 0.7
SORT1-203ENST00000471996 MAPK8IP2Q13387 824 aaPredicted RBP19.45■□□□□ 0.7
SORT1-203ENST00000471996 EIF4EBP2Q13542 120 aaPredicted RBP19.45■□□□□ 0.7
SORT1-203ENST00000471996 PDE1CQ14123 709 aaPredicted RBP19.45■□□□□ 0.7
SORT1-203ENST00000471996 TBR1Q16650 682 aa19.45■□□□□ 0.7
SORT1-203ENST00000471996 EDRF1Q3B7T1 1238 aa19.45■□□□□ 0.7
SORT1-203ENST00000471996 FBXL22Q6P050 247 aa19.45■□□□□ 0.7
SORT1-203ENST00000471996 RAB11FIP2Q7L804 512 aa19.45■□□□□ 0.7
SORT1-203ENST00000471996 JAMLQ86YT9 394 aa19.45■□□□□ 0.7
SORT1-203ENST00000471996 CCDC47Q96A33 483 aaKnown RBP19.45■□□□□ 0.7
SORT1-203ENST00000471996 SYNDIG1Q9H7V2 258 aa19.45■□□□□ 0.7
SORT1-203ENST00000471996 RELNP78509 3460 aa19.44■□□□□ 0.7
SORT1-203ENST00000471996 TLN1Q9Y490 2541 aaKnown RBP19.44■□□□□ 0.7
SORT1-203ENST00000471996 MT-CO1P00395 513 aa19.44■□□□□ 0.7
SORT1-203ENST00000471996 LIPCP11150 499 aa19.44■□□□□ 0.7
SORT1-203ENST00000471996 CENPCQ03188 943 aa19.44■□□□□ 0.7
SORT1-203ENST00000471996 LRMPQ12912 555 aa19.44■□□□□ 0.7
SORT1-203ENST00000471996 FOXD4L6Q3SYB3 417 aaPredicted RBP19.44■□□□□ 0.7
SORT1-203ENST00000471996 TPRG1LQ5T0D9 272 aa19.44■□□□□ 0.7
SORT1-203ENST00000471996 TCERG1LQ5VWI1 586 aa19.44■□□□□ 0.7
SORT1-203ENST00000471996 KIAA1161Q6NSJ0 714 aa19.44■□□□□ 0.7
SORT1-203ENST00000471996 FOXD4L3Q6VB84 417 aaPredicted RBP19.44■□□□□ 0.7
SORT1-203ENST00000471996 CHST14Q8NCH0 376 aa19.44■□□□□ 0.7
SORT1-203ENST00000471996 BTN2A2Q8WVV5 523 aa19.44■□□□□ 0.7
SORT1-203ENST00000471996 RPRD1AQ96P16 312 aaPredicted RBP19.44■□□□□ 0.7
SORT1-203ENST00000471996 SLC25A18Q9H1K4 315 aa19.44■□□□□ 0.7
SORT1-203ENST00000471996 SPASTQ9UBP0 616 aa19.44■□□□□ 0.7
SORT1-203ENST00000471996 USP25Q9UHP3 1055 aa19.44■□□□□ 0.7
SORT1-203ENST00000471996 PCDHB4Q9Y5E5 795 aa19.44■□□□□ 0.7
SORT1-203ENST00000471996 NBPF19A0A087WUL8 3843 aa19.43■□□□□ 0.7
SORT1-203ENST00000471996 SPINT1O43278 529 aa19.43■□□□□ 0.7
SORT1-203ENST00000471996 GCATO75600 419 aa19.43■□□□□ 0.7
SORT1-203ENST00000471996 EIF2B5Q13144 721 aaKnown RBP19.43■□□□□ 0.7
SORT1-203ENST00000471996 ARSIQ5FYB1 569 aa19.43■□□□□ 0.7
SORT1-203ENST00000471996 DCAF17Q5H9S7 520 aaPredicted RBP19.43■□□□□ 0.7
SORT1-203ENST00000471996 B3GNT8Q7Z7M8 397 aa19.43■□□□□ 0.7
SORT1-203ENST00000471996 ATP11CQ8NB49 1132 aa19.43■□□□□ 0.7
SORT1-203ENST00000471996 FEM1CQ96JP0 617 aa19.43■□□□□ 0.7
SORT1-203ENST00000471996 LENG8Q96PV6 779 aaPredicted RBP19.43■□□□□ 0.7
SORT1-203ENST00000471996 POPDC2Q9HBU9 364 aa19.43■□□□□ 0.7
SORT1-203ENST00000471996 EPB41L5Q9HCM4 733 aa19.43■□□□□ 0.7
SORT1-203ENST00000471996 ST7Q9NRC1 585 aa19.43■□□□□ 0.7
SORT1-203ENST00000471996 GEMIN8Q9NWZ8 242 aaKnown RBP19.43■□□□□ 0.7
SORT1-203ENST00000471996 SEPT10Q9P0V9 454 aa19.43■□□□□ 0.7
SORT1-203ENST00000471996 PCDHGA4Q9Y5G9 962 aa19.43■□□□□ 0.7
SORT1-203ENST00000471996 KIF26BQ2KJY2 2108 aa19.43■□□□□ 0.7
SORT1-203ENST00000471996 LMO7DNF2Z398 122 aa19.42■□□□□ 0.7
SORT1-203ENST00000471996 TMX2-CTNND1H3BSU7 103 aa19.42■□□□□ 0.7
SORT1-203ENST00000471996 K7ERQ8 282 aa19.42■□□□□ 0.7
SORT1-203ENST00000471996 FPGTO14772 594 aa19.42■□□□□ 0.7
SORT1-203ENST00000471996 CETN3O15182 167 aa19.42■□□□□ 0.7
SORT1-203ENST00000471996 NVLO15381 856 aaKnown RBP19.42■□□□□ 0.7
SORT1-203ENST00000471996 CALCAP01258 141 aa19.42■□□□□ 0.7
SORT1-203ENST00000471996 SLC2A3P11169 496 aa19.42■□□□□ 0.7
SORT1-203ENST00000471996 CR2P20023 1033 aa19.42■□□□□ 0.7
SORT1-203ENST00000471996 GPD2P43304 727 aa19.42■□□□□ 0.7
SORT1-203ENST00000471996 ACADSBP45954 432 aa19.42■□□□□ 0.7
SORT1-203ENST00000471996 IRAK1P51617 712 aa19.42■□□□□ 0.7
SORT1-203ENST00000471996 ADKP55263 362 aaKnown RBP19.42■□□□□ 0.7
SORT1-203ENST00000471996 PITX1P78337 314 aaPredicted RBP19.42■□□□□ 0.7
SORT1-203ENST00000471996 KRT83P78385 493 aa19.42■□□□□ 0.7
SORT1-203ENST00000471996 C1QBPQ07021 282 aaKnown RBP19.42■□□□□ 0.7
SORT1-203ENST00000471996 AUHQ13825 339 aaKnown RBP19.42■□□□□ 0.7
SORT1-203ENST00000471996 MANEAQ5SRI9 462 aa19.42■□□□□ 0.7
SORT1-203ENST00000471996 RBFAQ8N0V3 343 aa19.42■□□□□ 0.7
SORT1-203ENST00000471996 PPP1R16AQ96I34 528 aa19.42■□□□□ 0.7
SORT1-203ENST00000471996 KLF6Q99612 283 aaPredicted RBP19.42■□□□□ 0.7
SORT1-203ENST00000471996 STRADBQ9C0K7 418 aa19.42■□□□□ 0.7
SORT1-203ENST00000471996 TCEAL2Q9H3H9 227 aaPredicted RBP19.42■□□□□ 0.7
SORT1-203ENST00000471996 IL36AQ9UHA7 158 aa19.42■□□□□ 0.7
SORT1-203ENST00000471996 PADI4Q9UM07 663 aa19.42■□□□□ 0.7
SORT1-203ENST00000471996 TBC1D30Q9Y2I9 924 aa19.42■□□□□ 0.7
SORT1-203ENST00000471996 TEX15Q9BXT5 2789 aa19.42■□□□□ 0.7
SORT1-203ENST00000471996 FLNCQ14315 2725 aa19.41■□□□□ 0.7
SORT1-203ENST00000471996 SMAD6O43541 496 aaKnown RBP19.41■□□□□ 0.7
SORT1-203ENST00000471996 CLDN11O75508 207 aa19.41■□□□□ 0.7
SORT1-203ENST00000471996 PRR29P0C7W0 189 aa19.41■□□□□ 0.7
SORT1-203ENST00000471996 HGFP14210 728 aa19.41■□□□□ 0.7
SORT1-203ENST00000471996 NEK3P51956 506 aa19.41■□□□□ 0.7
SORT1-203ENST00000471996 PFN3P60673 137 aa19.41■□□□□ 0.7
SORT1-203ENST00000471996 YWHAZP63104 245 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms