RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 PTCH2Q9Y6C5 1203 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 DDHD2O94830 711 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 LRIG2O94898 1065 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 CAPNS1P04632 268 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 NCAM1P13591 858 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 YBX3P16989 372 aaKnown RBP eCLIP13.87□□□□□ -0.19
BRCA1-209ENST00000470026 TFEBP19484 476 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 LHX1P48742 406 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 SATB1Q01826 763 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 PIGGQ5H8A4 983 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 ARL13AQ5H913 290 aaPredicted RBP13.87□□□□□ -0.19
BRCA1-209ENST00000470026 DCLRE1AQ6PJP8 1040 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 SDCCAG8Q86SQ7 713 aaPredicted RBP13.87□□□□□ -0.19
BRCA1-209ENST00000470026 CENPLQ8N0S6 344 aaPredicted RBP13.87□□□□□ -0.19
BRCA1-209ENST00000470026 TMEM86AQ8N2M4 240 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 KYQ8NBH2 561 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 PDCD6IPQ8WUM4 868 aaKnown RBP13.87□□□□□ -0.19
BRCA1-209ENST00000470026 PCED1BQ96HM7 432 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 GPR78Q96P69 363 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 SERPINI1Q99574 410 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 WDR55Q9H6Y2 383 aaPredicted RBP13.87□□□□□ -0.19
BRCA1-209ENST00000470026 DDIT4Q9NX09 232 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 CPSF2Q9P2I0 782 aaKnown RBP13.87□□□□□ -0.19
BRCA1-209ENST00000470026 SLC39A10Q9ULF5 831 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 NEU3Q9UQ49 428 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 NUP205Q92621 2012 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 SHROOM3Q8TF72 1996 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 BTBD19C9JJ37 291 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 AP1G2O75843 785 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 PIGNO95427 931 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 TPH1P17752 444 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 CALRP27797 417 aaKnown RBP13.87□□□□□ -0.19
BRCA1-209ENST00000470026 PPARGP37231 505 aaPredicted RBP13.87□□□□□ -0.19
BRCA1-209ENST00000470026 DLG1Q12959 904 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 SLC12A1Q13621 1099 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 PRPSAP1Q14558 356 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 MFSD10Q14728 455 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 ZNF423Q2M1K9 1284 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 LIN52Q52LA3 116 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 PKN3Q6P5Z2 889 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 USP50Q70EL3 339 aaPredicted RBP13.87□□□□□ -0.19
BRCA1-209ENST00000470026 SNX32Q86XE0 403 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 DSELQ8IZU8 1212 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 SCML4Q8N228 414 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 PQLC1Q8N2U9 271 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 EFCAB3Q8N7B9 438 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 NPLOC4Q8TAT6 608 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 IRGQQ8WZA9 623 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 SENP8Q96LD8 212 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 APOL2Q9BQE5 337 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 TASP1Q9H6P5 420 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 CSNK1G1Q9HCP0 422 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.87□□□□□ -0.19
BRCA1-209ENST00000470026 OR12D3Q9UGF7 316 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 TLK1Q9UKI8 766 aa13.87□□□□□ -0.19
BRCA1-209ENST00000470026 DYNC1LI2O43237 492 aaPredicted RBP13.86□□□□□ -0.19
BRCA1-209ENST00000470026 TADA2AO75478 443 aa13.86□□□□□ -0.19
BRCA1-209ENST00000470026 JCHAINP01591 159 aa13.86□□□□□ -0.19
BRCA1-209ENST00000470026 USP17L7P0C7H9 530 aa13.86□□□□□ -0.19
BRCA1-209ENST00000470026 CLCN2P51788 898 aa13.86□□□□□ -0.19
BRCA1-209ENST00000470026 EIF4EBP2Q13542 120 aaPredicted RBP13.86□□□□□ -0.19
BRCA1-209ENST00000470026 RFTN1Q14699 578 aaPredicted RBP13.86□□□□□ -0.19
BRCA1-209ENST00000470026 TRIP10Q15642 601 aa13.86□□□□□ -0.19
BRCA1-209ENST00000470026 PCID2Q5JVF3 399 aa13.86□□□□□ -0.19
BRCA1-209ENST00000470026 ST13P4Q8IZP2 240 aaPredicted RBP13.86□□□□□ -0.19
BRCA1-209ENST00000470026 PGAM4Q8N0Y7 254 aa13.86□□□□□ -0.19
BRCA1-209ENST00000470026 FSTL5Q8N475 847 aaPredicted RBP13.86□□□□□ -0.19
BRCA1-209ENST00000470026 PIP4K2CQ8TBX8 421 aa13.86□□□□□ -0.19
BRCA1-209ENST00000470026 PPP1R13LQ8WUF5 828 aa13.86□□□□□ -0.19
BRCA1-209ENST00000470026 MAELQ96JY0 434 aaKnown RBP13.86□□□□□ -0.19
BRCA1-209ENST00000470026 FCRL5Q96RD9 977 aa13.86□□□□□ -0.19
BRCA1-209ENST00000470026 APBA2Q99767 749 aa13.86□□□□□ -0.19
BRCA1-209ENST00000470026 SPATA16Q9BXB7 569 aa13.86□□□□□ -0.19
BRCA1-209ENST00000470026 OSBPL2Q9H1P3 480 aa13.86□□□□□ -0.19
BRCA1-209ENST00000470026 WDCPQ9H6R7 721 aa13.86□□□□□ -0.19
BRCA1-209ENST00000470026 ZDHHC2Q9UIJ5 367 aa13.86□□□□□ -0.19
BRCA1-209ENST00000470026 SNX10Q9Y5X0 201 aa13.86□□□□□ -0.19
BRCA1-209ENST00000470026 MYBPHLA2RUH7 354 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 TREHO43280 583 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 DENRO43583 198 aaKnown RBP13.85□□□□□ -0.19
BRCA1-209ENST00000470026 SNUPNO95149 360 aaKnown RBP13.85□□□□□ -0.19
BRCA1-209ENST00000470026 AHSGP02765 367 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 PABPC4LP0CB38 370 aaKnown RBP13.85□□□□□ -0.19
BRCA1-209ENST00000470026 HOXC8P31273 242 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 SERPINB5P36952 375 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 ARCN1P48444 511 aaKnown RBP13.85□□□□□ -0.19
BRCA1-209ENST00000470026 NUDT2P50583 147 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 RABGGTBP53611 331 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 COG7P83436 770 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 USP10Q14694 798 aaKnown RBP13.85□□□□□ -0.19
BRCA1-209ENST00000470026 UGP2Q16851 508 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 LRRC36Q1X8D7 754 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 PPM1LQ5SGD2 360 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 DENND5AQ6IQ26 1287 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 LRRC8EQ6NSJ5 796 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 UGT2A3Q6UWM9 527 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 TMC7Q7Z402 723 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 TICAM1Q8IUC6 712 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 MARVELD2Q8N4S9 558 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 KCTD4Q8WVF5 259 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms