RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 NOL6Q9H6R4 1146 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 RPAP3Q9H6T3 665 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 PLAC1Q9HBJ0 212 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 GMIPQ9P107 970 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 KLQ9UEF7 1012 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 RAP2CQ9Y3L5 183 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 UGT2A1Q9Y4X1 527 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 PCDHGA7Q9Y5G6 932 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 PCDHAC2Q9Y5I4 1007 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 TCRBV5S1A1TA0A578 114 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 TCAF2A6NFQ2 919 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 C16orf96A6NNT2 1141 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 USP17L10C9JJH3 530 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 TPP1O14773 563 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 UGT2B11O75310 529 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 SEC24DO94855 1032 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 IL18RAPO95256 599 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 LSM8O95777 96 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 PTTG1O95997 202 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 PRKCGP05129 697 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 IL2RBP14784 551 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 IMPDH1P20839 514 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 MAGEA3P43357 314 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 TUFMP49411 452 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 ATXN3P54252 364 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 RPL7AP62424 266 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 DYNLT1P63172 113 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 IGBP1P78318 339 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 GALNT1Q10472 559 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 STX5Q13190 355 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 MTM1Q13496 603 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 DGUOKQ16854 277 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 C2CD6Q53TS8 623 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 RBM48Q5RL73 367 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 ERAP2Q6P179 960 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 DARS2Q6PI48 645 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 HACD2Q6Y1H2 254 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 ATG14Q6ZNE5 492 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 LINC00523Q86TU6 105 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 DAW1Q8N136 415 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 Q8N9G6 341 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 PHF10Q8WUB8 498 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 CYGBQ8WWM9 190 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 CDKL2Q92772 493 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 MFSD14AQ96MC6 490 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 CSF3RQ99062 836 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 EBNA1BP2Q99848 306 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 SLA2Q9H6Q3 261 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 SPAG4Q9NPE6 437 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 AGPAT4Q9NRZ5 378 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 CCM2LQ9NUG4 571 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 SMPD3Q9NY59 655 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 KCNN3Q9UGI6 736 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 CDYLQ9Y232 598 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 PCDHA1Q9Y5I3 950 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 ZSCAN5BA6NJL1 495 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 AQP12BA6NM10 295 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 F8VP50 259 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 STX16-NPEPL1H3BU86 382 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 BCAS1O75363 584 aaPredicted RBP9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 ALDOAP04075 364 aaKnown RBP9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 KDELR1P24390 212 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 IL12AP29459 219 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 GNA15P30679 374 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 ETV3P41162 512 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 ARCN1P48444 511 aaKnown RBP9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 PPP5CP53041 499 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 GABARAPL2P60520 117 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 TNK2Q07912 1038 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 INPP5AQ14642 412 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 NOMO1Q15155 1222 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 ZNF181Q2M3W8 571 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 QRICH1Q2TAL8 776 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 WDR44Q5JSH3 913 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 LDLRAP1Q5SW96 308 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 STEAP4Q687X5 459 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 LMBRD2Q68DH5 695 aaPredicted RBP9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 TUBA3EQ6PEY2 450 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 DCUN1D2Q6PH85 259 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 CRTC3Q6UUV7 619 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 OTOP1Q7RTM1 612 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 PODNQ7Z5L7 613 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 ADAMTSL2Q86TH1 951 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 DHFR2Q86XF0 187 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 EPHX4Q8IUS5 362 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 CCDC28AQ8IWP9 274 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 AQP12AQ8IXF9 295 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 SCML4Q8N228 414 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 TOR1AIP2Q8NFQ8 470 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 FKBP10Q96AY3 582 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 HDAC11Q96DB2 347 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 CENPNQ96H22 339 aaPredicted RBP9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 MCEEQ96PE7 176 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 LHPPQ9H008 270 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 RNPEPQ9H4A4 650 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 HOXC10Q9NYD6 342 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 MOCS1Q9NZB8 636 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 CD300AQ9UGN4 299 aa9.15□□□□□ -0.94
SMARCE1-207ENST00000469334 WBP11Q9Y2W2 641 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms