RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 ELMSAN1Q6PJG2 1045 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 POTEHQ6S545 545 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 OTOP3Q7RTS5 596 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 C4orf33Q8N1A6 199 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 TEX26Q8N6G2 289 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 CNTD1Q8N815 330 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 KLHL23Q8NBE8 558 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 MGARPQ8TDB4 240 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 CKAP2Q8WWK9 683 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 ARNTL2Q8WYA1 636 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 IMP4Q96G21 291 aaKnown RBP9.5□□□□□ -0.89
SMC1A-205ENST00000469129 OXNAD1Q96HP4 312 aaPredicted RBP9.5□□□□□ -0.89
SMC1A-205ENST00000469129 KLHL5Q96PQ7 755 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 CCT8L2Q96SF2 557 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 CPNE1Q99829 537 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 FICDQ9BVA6 458 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 POLR1EQ9GZS1 481 aaKnown RBP9.5□□□□□ -0.89
SMC1A-205ENST00000469129 FAM107BQ9H098 131 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 TRPC7Q9HCX4 862 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 NT5MQ9NPB1 228 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 ASAH2Q9NR71 780 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 STOML2Q9UJZ1 356 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 ZFP37Q9Y6Q3 630 aaPredicted RBP9.5□□□□□ -0.89
SMC1A-205ENST00000469129 FAM169AQ9Y6X4 670 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 ZNF106Q9H2Y7 1883 aaKnown RBP9.5□□□□□ -0.89
SMC1A-205ENST00000469129 ATXN2Q99700 1313 aaKnown RBP9.5□□□□□ -0.89
SMC1A-205ENST00000469129 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.49□□□□□ -0.89
SMC1A-205ENST00000469129 TRAV19A0A0A6YYK7 116 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 GOLGA6L7A0A1B0GV03 622 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 C2orf78A6NCI8 922 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 COPEO14579 308 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 TYROBPO43914 113 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 USP12O75317 370 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 SPAG7O75391 227 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 CXCL14O95715 111 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 F11P03951 625 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 LINC00271P0C7V0 271 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 IRF1P10914 325 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 DDX6P26196 483 aaKnown RBP eCLIP9.49□□□□□ -0.89
SMC1A-205ENST00000469129 GABRR2P28476 465 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 GP5P40197 560 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 CCNFP41002 786 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 CSE1LP55060 971 aaKnown RBP9.49□□□□□ -0.89
SMC1A-205ENST00000469129 SMAD3P84022 425 aaKnown RBP9.49□□□□□ -0.89
SMC1A-205ENST00000469129 ITKQ08881 620 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 ILF2Q12905 390 aaKnown RBP9.49□□□□□ -0.89
SMC1A-205ENST00000469129 ZNF177Q13360 481 aaPredicted RBP9.49□□□□□ -0.89
SMC1A-205ENST00000469129 LAMB3Q13751 1172 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 PCID2Q5JVF3 399 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 HABP4Q5JVS0 413 aaKnown RBP9.49□□□□□ -0.89
SMC1A-205ENST00000469129 PPM1LQ5SGD2 360 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 PDPK2PQ6A1A2 396 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 C16orf59Q7L2K0 433 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 PRPF39Q86UA1 669 aaKnown RBP9.49□□□□□ -0.89
SMC1A-205ENST00000469129 TMEM135Q86UB9 458 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 CIR1Q86X95 450 aaPredicted RBP9.49□□□□□ -0.89
SMC1A-205ENST00000469129 BANPQ8N9N5 519 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 LEMD2Q8NC56 503 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 KREMEN2Q8NCW0 462 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 ACMSDQ8TDX5 336 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 PRICKLE1Q96MT3 831 aaPredicted RBP9.49□□□□□ -0.89
SMC1A-205ENST00000469129 SAMD11Q96NU1 681 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 TGS1Q96RS0 853 aaKnown RBP9.49□□□□□ -0.89
SMC1A-205ENST00000469129 RANBP9Q96S59 729 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 GDF15Q99988 308 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 TCF25Q9BQ70 676 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 KIFC1Q9BW19 673 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 CINPQ9BW66 212 aaPredicted RBP9.49□□□□□ -0.89
SMC1A-205ENST00000469129 PRO3102Q9H379 93 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 IL21Q9HBE4 155 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 PLAC1Q9HBJ0 212 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 ZNF334Q9HCZ1 680 aaPredicted RBP9.49□□□□□ -0.89
SMC1A-205ENST00000469129 TLR9Q9NR96 1032 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 UBA2Q9UBT2 640 aaPredicted RBP9.49□□□□□ -0.89
SMC1A-205ENST00000469129 SEPT3Q9UH03 358 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 DPP7Q9UHL4 492 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 GGA2Q9UJY4 613 aa9.49□□□□□ -0.89
SMC1A-205ENST00000469129 RANBP2P49792 3224 aaKnown RBP9.48□□□□□ -0.89
SMC1A-205ENST00000469129 TRIOBPQ9H2D6 2365 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 A0A1W2PPM1 405 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 HEATR9A2RTY3 570 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 SOBPA7XYQ1 873 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 CXorf49A8MYA2 514 aaPredicted RBP9.48□□□□□ -0.89
SMC1A-205ENST00000469129 J3KR12 359 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 TIMM44O43615 452 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 ATP9BO43861 1147 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 PEX11BO96011 259 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 RB1P06400 928 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 CKMP06732 381 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 VIMP08670 466 aaKnown RBP9.48□□□□□ -0.89
SMC1A-205ENST00000469129 CREB1P16220 341 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 HLA-DPA1P20036 260 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 CES1P23141 567 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 SPRP35270 261 aaPredicted RBP9.48□□□□□ -0.89
SMC1A-205ENST00000469129 ADRA1AP35348 466 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 BMPR1AP36894 532 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 HADHAP40939 763 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 CCT5P48643 541 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 SEC24CP53992 1094 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 CRADDP78560 199 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms