RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 BUB1O43683 1085 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 PRAMEF11O60813 436 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 NDUFS2O75306 463 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 IGSF6O95976 241 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 RETP07949 1114 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 KDELR1P24390 212 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 CD6P30203 668 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 NUDT1P36639 197 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 ACVRL1P37023 503 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 STK19P49842 368 aaPredicted RBP8.72□□□□□ -1.01
SSBP1-208ENST00000469123 TAS2R40P59535 323 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 ARF5P84085 180 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 ZNF33AQ06730 810 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 IL10RBQ08334 325 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 DMWDQ09019 674 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 TFDP2Q14188 446 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 PAFAH1B3Q15102 231 aaKnown RBP8.72□□□□□ -1.01
SSBP1-208ENST00000469123 CST6Q15828 149 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 ANKRD20A8PQ5CZ79 823 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 RALGPS1Q5JS13 557 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 DAB2IPQ5VWQ8 1189 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 PMS2CLQ68D20 193 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 PRR23BQ6ZRT6 265 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 KATNAL2Q8IYT4 538 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 RCOR2Q8IZ40 523 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 ATPAF2Q8N5M1 289 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 UBL4BQ8N7F7 174 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 ACRBPQ8NEB7 543 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 CADM4Q8NFZ8 388 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 FATE1Q969F0 183 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 HMCESQ96FZ2 354 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 GDAP1L1Q96MZ0 367 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 ALS2CR12Q96Q35 445 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 TPSD1Q9BZJ3 242 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 MKRN2Q9H000 416 aaKnown RBP8.72□□□□□ -1.01
SSBP1-208ENST00000469123 BRD8Q9H0E9 1235 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 DUSP15Q9H1R2 295 aaPredicted RBP8.72□□□□□ -1.01
SSBP1-208ENST00000469123 PABPC3Q9H361 631 aaKnown RBP8.72□□□□□ -1.01
SSBP1-208ENST00000469123 KDM4CQ9H3R0 1056 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 NOL6Q9H6R4 1146 aaKnown RBP8.72□□□□□ -1.01
SSBP1-208ENST00000469123 SP110Q9HB58 689 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 ZDHHC4Q9NPG8 344 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 DYRK4Q9NR20 520 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 NDFIP2Q9NV92 336 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 AMACRQ9UHK6 382 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 EFR3BQ9Y2G0 817 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 REXO2Q9Y3B8 237 aaKnown RBP8.72□□□□□ -1.01
SSBP1-208ENST00000469123 ADGRG1Q9Y653 693 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 R4GN57 208 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 NUMA1Q14980 2115 aa8.71□□□□□ -1.01
SSBP1-208ENST00000469123 IGHV1OR15-9A0A0B4J2B8 117 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 ANTXRLA6NF34 631 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 DFFAO00273 331 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 TMCC1O94876 653 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 ZRANB2O95218 330 aaKnown RBP eCLIP8.71□□□□□ -1.02
SSBP1-208ENST00000469123 POP4O95707 220 aaKnown RBP8.71□□□□□ -1.02
SSBP1-208ENST00000469123 MT-CO1P00395 513 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 IL1BP01584 269 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 KRT1P04264 644 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 PTMAP06454 111 aaKnown RBP8.71□□□□□ -1.02
SSBP1-208ENST00000469123 TCF4P15884 667 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 AMPD1P23109 780 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 IL4RP24394 825 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 NFKBIAP25963 317 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 CHRNA3P32297 505 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 CTNNA1P35221 906 aaKnown RBP8.71□□□□□ -1.02
SSBP1-208ENST00000469123 PTPN7P35236 360 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 GJC1P36383 396 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 CSNK1DP48730 415 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 PXNP49023 591 aaPredicted RBP8.71□□□□□ -1.02
SSBP1-208ENST00000469123 NR2C2P49116 596 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 PAPOLAP51003 745 aaKnown RBP8.71□□□□□ -1.02
SSBP1-208ENST00000469123 TPMTP51580 245 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 SUOXP51687 545 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 RPS14P62263 151 aaKnown RBP8.71□□□□□ -1.02
SSBP1-208ENST00000469123 NSUN2Q08J23 767 aaKnown RBP eCLIP8.71□□□□□ -1.02
SSBP1-208ENST00000469123 PPP2R5EQ16537 467 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 PLK5Q496M5 336 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 CARD16Q5EG05 197 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 TFDP3Q5H9I0 405 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 SYCP2LQ5T4T6 812 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 TXNRD3NBQ6F5E7 133 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 LINGO4Q6UY18 593 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 Q6ZVU0 165 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 ARHGAP12Q8IWW6 846 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 STK40Q8N2I9 435 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 SUMF1Q8NBK3 374 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 OR2AP1Q8NGE2 309 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 OR2A12Q8NGT7 310 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 EXD1Q8NHP7 514 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 HCAR2Q8TDS4 363 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 RUBCNQ92622 972 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 RAB7BQ96AH8 199 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 RNF157Q96PX1 679 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 TUBGCP5Q96RT8 1024 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 OMDQ99983 421 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 HEPHQ9BQS7 1158 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 MAGEB5Q9BZ81 275 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 SLC39A8Q9C0K1 460 aa8.71□□□□□ -1.02
SSBP1-208ENST00000469123 LACRTQ9GZZ8 138 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms