RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 SFTPA1Q8IWL2 248 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 CEP112Q8N8E3 955 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 NSMCE1Q8WV22 266 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 HTR3CQ8WXA8 447 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 CASKIN2Q8WXE0 1202 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 SHDQ96IW2 340 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 RUNDC3BQ96NL0 473 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 TMEM121Q9BTD3 319 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 DDX47Q9H0S4 455 aaKnown RBP13.51□□□□□ -0.25
PDCD11-202ENST00000466959 C10orf88Q9H8K7 445 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 USP29Q9HBJ7 922 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 ERVW-1Q9UQF0 538 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 HS3ST2Q9Y278 367 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 F5P12259 2224 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 KRBA1A5PL33 1030 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 PRR23AA6NEV1 266 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 K7EQS6 105 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 KCNK1O00180 336 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 KCNN4O15554 427 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 CD160O95971 181 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 CCNB1P14635 433 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 KCNJ1P48048 391 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 STK19P49842 368 aaPredicted RBP13.5□□□□□ -0.25
PDCD11-202ENST00000466959 RENBPP51606 427 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 LMNB2Q03252 620 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 C2orf54Q08AI8 447 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 HNRNPDQ14103 355 aaKnown RBP13.5□□□□□ -0.25
PDCD11-202ENST00000466959 LBRQ14739 615 aaKnown RBP13.5□□□□□ -0.25
PDCD11-202ENST00000466959 INO80DQ53TQ3 878 aaPredicted RBP13.5□□□□□ -0.25
PDCD11-202ENST00000466959 CCDC137Q6PK04 289 aaKnown RBP13.5□□□□□ -0.25
PDCD11-202ENST00000466959 ZNF852Q6ZMS4 543 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 LEKR1Q6ZMV7 388 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 SH2D3CQ8N5H7 860 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 TEX26Q8N6G2 289 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 KDM1BQ8NB78 822 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 ATL2Q8NHH9 583 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 GRK7Q8WTQ7 553 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 CYB5D2Q8WUJ1 264 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 SORCS1Q8WY21 1168 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 EZH1Q92800 747 aaPredicted RBP13.5□□□□□ -0.25
PDCD11-202ENST00000466959 RTP4Q96DX8 246 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 MRGPRX3Q96LB0 322 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 CCDC114Q96M63 670 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 IL12RB2Q99665 862 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 SEPT10Q9P0V9 454 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 STARD13Q9Y3M8 1113 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 ACTL7AQ9Y615 435 aa13.5□□□□□ -0.25
PDCD11-202ENST00000466959 RIF1Q5UIP0 2472 aaKnown RBP13.5□□□□□ -0.25
PDCD11-202ENST00000466959 CTAGE15A4D2H0 777 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 SGK1O00141 431 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 RNF103O00237 685 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 NPC1O15118 1278 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 ATP9BO43861 1147 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 STK10O94804 968 aaKnown RBP13.49□□□□□ -0.25
PDCD11-202ENST00000466959 TMCC1O94876 653 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 MT-CO1P00395 513 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 EGFP01133 1207 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 JCHAINP01591 159 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 CTAGE8P0CG41 777 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 SRCP12931 536 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 HNRNPLP14866 589 aaKnown RBP eCLIP13.49□□□□□ -0.25
PDCD11-202ENST00000466959 PTPN3P26045 913 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 STIP1P31948 543 aaKnown RBP13.49□□□□□ -0.25
PDCD11-202ENST00000466959 MMP13P45452 471 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 STARD6P59095 220 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 ST8SIA6P61647 398 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 SLC10A7Q0GE19 358 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 WASHC5Q12768 1159 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 ZBTB17Q13105 803 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 CYTH1Q15438 398 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 PTPRNQ16849 979 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 MARC1Q5VT66 337 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 ASCL5Q7RTU5 278 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 CTAGE6Q86UF2 777 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 CTAGE4Q8IX94 777 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 KLHL7Q8IXQ5 586 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 CCDC105Q8IYK2 499 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 SIX5Q8N196 739 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 BBS5Q8N3I7 341 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 ALLCQ8N6M5 410 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 FAM71DQ8N9W8 422 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 ATP11CQ8NB49 1132 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 KCNV2Q8TDN2 545 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 SLCO2A1Q92959 643 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 MYO19Q96H55 970 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 RPL10LQ96L21 214 aaKnown RBP13.49□□□□□ -0.25
PDCD11-202ENST00000466959 KRT12Q99456 494 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 VAT1Q99536 393 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 CARD6Q9BX69 1037 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 CEP44Q9C0F1 390 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 RRAGDQ9NQL2 400 aaPredicted RBP13.49□□□□□ -0.25
PDCD11-202ENST00000466959 THAP10Q9P2Z0 257 aaPredicted RBP13.49□□□□□ -0.25
PDCD11-202ENST00000466959 SEPT3Q9UH03 358 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 PCYOX1Q9UHG3 505 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 AMACRQ9UHK6 382 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 FEZ2Q9UHY8 353 aaPredicted RBP13.49□□□□□ -0.25
PDCD11-202ENST00000466959 HCN2Q9UL51 889 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 PLA2G4CQ9UP65 541 aa13.49□□□□□ -0.25
PDCD11-202ENST00000466959 MRPS17Q9Y2R5 130 aaKnown RBP13.49□□□□□ -0.25
PDCD11-202ENST00000466959 C5orf60A6NFR6 353 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms