RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 PYM1Q9BRP8 204 aaKnown RBP6.17□□□□□ -1.42
NCL-208ENST00000466274 TARS2Q9BW92 718 aaKnown RBP6.17□□□□□ -1.42
NCL-208ENST00000466274 ZNF768Q9H5H4 540 aaKnown RBP6.17□□□□□ -1.42
NCL-208ENST00000466274 C6orf106Q9H6K1 298 aaPredicted RBP6.17□□□□□ -1.42
NCL-208ENST00000466274 ERVMER34-1Q9H9K5 563 aa6.17□□□□□ -1.42
NCL-208ENST00000466274 SMPD4Q9NXE4 827 aa6.17□□□□□ -1.42
NCL-208ENST00000466274 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.17□□□□□ -1.42
NCL-208ENST00000466274 SEPT10Q9P0V9 454 aa6.17□□□□□ -1.42
NCL-208ENST00000466274 CNOT11Q9UKZ1 510 aaKnown RBP6.17□□□□□ -1.42
NCL-208ENST00000466274 PI4KAP42356 2102 aa6.17□□□□□ -1.42
NCL-208ENST00000466274 NUP210Q8TEM1 1887 aaPredicted RBP6.17□□□□□ -1.42
NCL-208ENST00000466274 TNRC6BQ9UPQ9 1833 aaKnown RBP6.16□□□□□ -1.42
NCL-208ENST00000466274 A0A087X0B3 334 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 TTC26A0AVF1 554 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 ZNF840PA6NDX5 716 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 SLC27A2O14975 620 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 CLDN3O15551 220 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 OPA1O60313 960 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 TSPAN3O60637 253 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 ITGB3P05106 788 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 GP1BAP07359 652 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 HMGB1P09429 215 aaKnown RBP6.16□□□□□ -1.42
NCL-208ENST00000466274 CXCL8P10145 99 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 MBL2P11226 248 aaPredicted RBP6.16□□□□□ -1.42
NCL-208ENST00000466274 PLS3P13797 630 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 CHMLP26374 656 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 ANXA13P27216 316 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 RXRGP48443 463 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 TAF6P49848 677 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 CDH8P55286 799 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 SPAG1Q07617 926 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 PDIA5Q14554 519 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 TBR1Q16650 682 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 SKIDA1Q1XH10 827 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 CFAP221Q4G0U5 840 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 C3orf38Q5JPI3 329 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 KCNT1Q5JUK3 1230 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 PRAMEF14Q5SWL7 426 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 SPATA1Q5VX52 437 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 C9orf57Q5W0N0 161 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 LAYNQ6UX15 382 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 SCN4BQ8IWT1 228 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 SRRM1Q8IYB3 904 aaKnown RBP6.16□□□□□ -1.42
NCL-208ENST00000466274 LINC00482Q8N8I6 264 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 PLEKHO2Q8TD55 490 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 BIRC7Q96CA5 298 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 SPATA17Q96L03 361 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 ACBD6Q9BR61 282 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 RWDD1Q9H446 243 aaPredicted RBP6.16□□□□□ -1.42
NCL-208ENST00000466274 SGK2Q9HBY8 427 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 TUFT1Q9NNX1 390 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 AASDHPPTQ9NRN7 309 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 APEX2Q9UBZ4 518 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 TUBD1Q9UJT1 453 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 SATB2Q9UPW6 733 aa6.16□□□□□ -1.42
NCL-208ENST00000466274 ITPR3Q14573 2671 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 A0A087WWV3 80 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 A0A1W2PPC4 97 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 CDRT15L2A8MXV6 281 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 WASH3PC4AMC7 463 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 PRRT4C9JH25 899 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 NEDD8-MDP1E9PL57 170 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 PIRO00625 290 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 SCAMP3O14828 347 aaKnown RBP6.15□□□□□ -1.42
NCL-208ENST00000466274 CACNG3O60359 315 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 MAGEC1O60732 1142 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 KCNH1O95259 989 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 DDAH2O95865 285 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 OLFM2O95897 454 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 ALPPL2P10696 532 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 TYRP14679 529 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 IFNAR1P17181 557 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 CD38P28907 300 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 MAGEA11P43364 429 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 EXOSC10Q01780 885 aaKnown RBP6.15□□□□□ -1.42
NCL-208ENST00000466274 NUCB1Q02818 461 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 ARID5AQ03989 594 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 ZBTB16Q05516 673 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 MCL1Q07820 350 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 CALCRLQ16602 461 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 TTC31Q49AM3 519 aaPredicted RBP6.15□□□□□ -1.42
NCL-208ENST00000466274 WSCD1Q658N2 575 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 CREB3L3Q68CJ9 461 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 C4orf50Q6ZRC1 276 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 DENND5BQ6ZUT9 1274 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 CLEC14AQ86T13 490 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 STK32CQ86UX6 486 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 ZC3H18Q86VM9 953 aaKnown RBP6.15□□□□□ -1.42
NCL-208ENST00000466274 TMEM25Q86YD3 366 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 OR6P1Q8NGX9 317 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 ERMNQ8TAM6 284 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 ADAMTS17Q8TE56 1095 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 SLITRK1Q96PX8 696 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 RBM15Q96T37 977 aaKnown RBP eCLIP6.15□□□□□ -1.422e-13■■■□□ 17.2
NCL-208ENST00000466274 BBS2Q9BXC9 721 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 CCSER1Q9C0I3 900 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 LHX5Q9H2C1 402 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 USP29Q9HBJ7 922 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 KMT5AQ9NQR1 393 aa6.15□□□□□ -1.42
NCL-208ENST00000466274 MARCH2Q9P0N8 246 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms