RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 RYBPQ8N488 228 aaPredicted RBP9.95□□□□□ -0.82
RTFDC1-205ENST00000466260 ZCCHC9Q8N567 271 aaKnown RBP9.95□□□□□ -0.82
RTFDC1-205ENST00000466260 KDM1BQ8NB78 822 aa9.95□□□□□ -0.82
RTFDC1-205ENST00000466260 CHST14Q8NCH0 376 aa9.95□□□□□ -0.82
RTFDC1-205ENST00000466260 OR6K2Q8NGY2 324 aa9.95□□□□□ -0.82
RTFDC1-205ENST00000466260 FRS2Q8WU20 508 aa9.95□□□□□ -0.82
RTFDC1-205ENST00000466260 RMDN1Q96DB5 314 aa9.95□□□□□ -0.82
RTFDC1-205ENST00000466260 CELF6Q96J87 481 aaKnown RBP9.95□□□□□ -0.82
RTFDC1-205ENST00000466260 DNAJC7Q99615 494 aa9.95□□□□□ -0.82
RTFDC1-205ENST00000466260 C6orf106Q9H6K1 298 aaPredicted RBP9.95□□□□□ -0.82
RTFDC1-205ENST00000466260 CATSPERBQ9H7T0 1116 aa9.95□□□□□ -0.82
RTFDC1-205ENST00000466260 NHEJ1Q9H9Q4 299 aaPredicted RBP9.95□□□□□ -0.82
RTFDC1-205ENST00000466260 SARDHQ9UL12 918 aa9.95□□□□□ -0.82
RTFDC1-205ENST00000466260 PTPRZ1P23471 2315 aaPredicted RBP9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 PCDH15Q96QU1 1955 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 C1QTNF3-AMACRE9PGA6 284 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 KPNA3O00505 521 aaPredicted RBP9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 BUB1O43683 1085 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 ATP9BO43861 1147 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 LRP3O75074 770 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 SEMA4FO95754 770 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 H2AFZP0C0S5 128 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 IL1R2P27930 398 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 HNRNPH3P31942 346 aaKnown RBP9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 RECQLP46063 649 aaPredicted RBP9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 SERPINH1P50454 418 aaKnown RBP9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 AIF1P55008 147 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 IRX4P78413 519 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 UAP1L1Q3KQV9 507 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 PLA2G2CQ5R387 149 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 ZFYVE27Q5T4F4 411 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 SYCP2LQ5T4T6 812 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 TXNRD3NBQ6F5E7 133 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 RETSATQ6NUM9 610 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 H2AFVQ71UI9 128 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 METTL3Q86U44 580 aaKnown RBP9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 SYT12Q8IV01 421 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 AADATQ8N5Z0 425 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 RTL3Q8N8U3 475 aaKnown RBP9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 OR14C36Q8NHC7 312 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 PIP4K2CQ8TBX8 421 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 FNIP1Q8TF40 1166 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 HMCESQ96FZ2 354 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 CCDC114Q96M63 670 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 CCDC42Q96M95 316 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 FAM129BQ96TA1 746 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 GTPBP2Q9BX10 602 aaKnown RBP9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 NUSAP1Q9BXS6 441 aaKnown RBP9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 NEUROG2Q9H2A3 272 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 ZDHHC6Q9H6R6 413 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 OSGEPQ9NPF4 335 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 KLHL11Q9NVR0 708 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 IP6K2Q9UHH9 426 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 EIF2B4Q9UI10 523 aaKnown RBP9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 HPCAL4Q9UM19 191 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 HS3ST2Q9Y278 367 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 MFHAS1Q9Y4C4 1052 aa9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 RIF1Q5UIP0 2472 aaKnown RBP9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 EP300Q09472 2414 aaPredicted RBP9.94□□□□□ -0.82
RTFDC1-205ENST00000466260 SSU72P8A0A1W2PR75 194 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 LNP1A1A4G5 178 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 RASA4BC9J798 803 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 MYO1FO00160 1098 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 RNF103O00237 685 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 DFFAO00273 331 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 ZSCAN12O43309 604 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 RASA4O43374 803 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 ZMPSTE24O75844 475 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 ADH1BP00325 375 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 CYP1A2P05177 515 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 CTSLP07711 333 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 ERCC2P18074 760 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 C5AR1P21730 350 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 GKP32189 559 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 ETFBP38117 255 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 ARL4AP40617 200 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 ATXN3P54252 364 aaPredicted RBP9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 ZBTB16Q05516 673 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 TBX2Q13207 712 aaPredicted RBP9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 SEMA3BQ13214 749 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 PIGHQ14442 188 aaPredicted RBP9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 KRT81Q14533 505 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 MESDQ14696 234 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 WDR45BQ5MNZ6 344 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 NCEH1Q6PIU2 408 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 LAYNQ6UX15 382 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 ZNF783Q6ZMS7 281 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 CYP4V2Q6ZWL3 525 aaPredicted RBP9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 DSG4Q86SJ6 1040 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 OR2A12Q8NGT7 310 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 OR2I1PQ8NGU4 316 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 KIF18AQ8NI77 898 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 NETO1Q8TDF5 533 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 FOXJ1Q92949 421 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 ZNF419Q96HQ0 510 aaPredicted RBP9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 EXOC2Q96KP1 924 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 KLC2Q9H0B6 622 aa9.93□□□□□ -0.82
RTFDC1-205ENST00000466260 MAGEH1Q9H213 219 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms