RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 NEU3Q9UQ49 428 aa21■□□□□ 0.95
PDLIM4-205ENST00000463615 CHD6Q8TD26 2715 aa21■□□□□ 0.95
PDLIM4-205ENST00000463615 TP53BP1Q12888 1972 aaPredicted RBP20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 FAM170AA1A519 330 aa20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 MAGEC1O60732 1142 aa20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 ATXN1LP0C7T5 689 aaKnown RBP20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 KRT3P12035 628 aa20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 RHOQP17081 205 aa20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 GLDCP23378 1020 aa20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 HDAC4P56524 1084 aa20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 ARF5P84085 180 aa20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 C1QBPQ07021 282 aaKnown RBP20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 SCAPQ12770 1279 aa20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 SETMARQ53H47 684 aaPredicted RBP20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 RAB6CQ53S08 254 aa20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 LINGO4Q6UY18 593 aa20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 MON1BQ7L1V2 547 aa20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 TMPRSS7Q7RTY8 843 aa20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 PCDH20Q8N6Y1 951 aaKnown RBP20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 ISG20Q96AZ6 181 aaKnown RBP20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 RAB6CQ9H0N0 254 aa20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 ATP13A1Q9HD20 1204 aa20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 TMEM248Q9NWD8 314 aa20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 WASF2Q9Y6W5 498 aa20.99■□□□□ 0.95
PDLIM4-205ENST00000463615 SIGLEC16A6NMB1 481 aa20.98■□□□□ 0.95
PDLIM4-205ENST00000463615 PRAMEF26H0Y7S4 382 aa20.98■□□□□ 0.95
PDLIM4-205ENST00000463615 CBX4O00257 560 aa20.98■□□□□ 0.95
PDLIM4-205ENST00000463615 CD160O95971 181 aa20.98■□□□□ 0.95
PDLIM4-205ENST00000463615 CDK11BP21127 795 aaKnown RBP20.98■□□□□ 0.95
PDLIM4-205ENST00000463615 RFC1P35251 1148 aaPredicted RBP20.98■□□□□ 0.95
PDLIM4-205ENST00000463615 ARRB1P49407 418 aaPredicted RBP20.98■□□□□ 0.95
PDLIM4-205ENST00000463615 TMEM145Q8NBT3 493 aa20.98■□□□□ 0.95
PDLIM4-205ENST00000463615 CHST14Q8NCH0 376 aa20.98■□□□□ 0.95
PDLIM4-205ENST00000463615 ARRDC3Q96B67 414 aa20.98■□□□□ 0.95
PDLIM4-205ENST00000463615 IL36AQ9UHA7 158 aa20.98■□□□□ 0.95
PDLIM4-205ENST00000463615 MYO6Q9UM54 1294 aa20.98■□□□□ 0.95
PDLIM4-205ENST00000463615 ZFHX4Q86UP3 3567 aa20.97■□□□□ 0.95
PDLIM4-205ENST00000463615 KPNA3O00505 521 aaPredicted RBP20.97■□□□□ 0.95
PDLIM4-205ENST00000463615 EPHA8P29322 1005 aaPredicted RBP20.97■□□□□ 0.95
PDLIM4-205ENST00000463615 RECQLP46063 649 aaPredicted RBP20.97■□□□□ 0.95
PDLIM4-205ENST00000463615 CDO1Q16878 200 aa20.97■□□□□ 0.95
PDLIM4-205ENST00000463615 WDR59Q6PJI9 974 aa20.97■□□□□ 0.95
PDLIM4-205ENST00000463615 DPY19L3Q6ZPD9 716 aa20.97■□□□□ 0.95
PDLIM4-205ENST00000463615 ERN2Q76MJ5 926 aaKnown RBP20.97■□□□□ 0.95
PDLIM4-205ENST00000463615 SPATS2Q86XZ4 545 aaKnown RBP20.97■□□□□ 0.95
PDLIM4-205ENST00000463615 FAM172AQ8WUF8 416 aa20.97■□□□□ 0.95
PDLIM4-205ENST00000463615 ZCCHC14Q8WYQ9 949 aaKnown RBP20.97■□□□□ 0.95
PDLIM4-205ENST00000463615 PPP1R16AQ96I34 528 aa20.97■□□□□ 0.95
PDLIM4-205ENST00000463615 PCMTD1Q96MG8 357 aaPredicted RBP20.97■□□□□ 0.95
PDLIM4-205ENST00000463615 AGPAT1Q99943 283 aa20.97■□□□□ 0.95
PDLIM4-205ENST00000463615 BPIFA3Q9BQP9 254 aa20.97■□□□□ 0.95
PDLIM4-205ENST00000463615 SPON2Q9BUD6 331 aa20.97■□□□□ 0.95
PDLIM4-205ENST00000463615 MAGEH1Q9H213 219 aa20.97■□□□□ 0.95
PDLIM4-205ENST00000463615 PCDHGA1Q9Y5H4 931 aa20.97■□□□□ 0.95
PDLIM4-205ENST00000463615 PLXNB3Q9ULL4 1909 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 SPEGQ15772 3267 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 FAM72CH0Y354 149 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 BNIP3LO60238 219 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 LRIG2O94898 1065 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 GJB6O95452 261 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 PLEKP08567 350 aaPredicted RBP20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 CCDC172P0C7W6 258 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 GPD1P21695 349 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 GEMIN4P57678 1058 aaKnown RBP20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 TYRO3Q06418 890 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 STAT4Q14765 748 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 POM121L1PQ3SYA9 428 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 CARD16Q5EG05 197 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 PPP1R15BQ5SWA1 713 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 PRAMEF14Q5SWL7 426 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 FAM72AQ5TYM5 149 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 SFMBT2Q5VUG0 894 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 FAM72DQ6L9T8 149 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 KANSL1Q7Z3B3 1105 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 PHLDB2Q86SQ0 1253 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 HORMAD1Q86X24 394 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 FAM72BQ86X60 149 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 DRC7Q8IY82 874 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 CCDC185Q8N715 623 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 ARHGEF2Q92974 986 aaKnown RBP20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 HEPHQ9BQS7 1158 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 SYT11Q9BT88 431 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 SELENOOQ9BVL4 669 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 DYRK4Q9NR20 520 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 NDFIP2Q9NV92 336 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 PTPRBP23467 1997 aa20.96■□□□□ 0.95
PDLIM4-205ENST00000463615 PKD1L2Q7Z442 2459 aa20.95■□□□□ 0.94
PDLIM4-205ENST00000463615 RNF103O00237 685 aa20.95■□□□□ 0.94
PDLIM4-205ENST00000463615 LEFTY1O75610 366 aa20.95■□□□□ 0.94
PDLIM4-205ENST00000463615 ATP1A3P13637 1013 aa20.95■□□□□ 0.94
PDLIM4-205ENST00000463615 FERP16591 822 aa20.95■□□□□ 0.94
PDLIM4-205ENST00000463615 ITGB7P26010 798 aa20.95■□□□□ 0.94
PDLIM4-205ENST00000463615 MAT2AP31153 395 aaKnown RBP20.95■□□□□ 0.94
PDLIM4-205ENST00000463615 L1CAMP32004 1257 aa20.95■□□□□ 0.94
PDLIM4-205ENST00000463615 ZNF143P52747 638 aaPredicted RBP20.95■□□□□ 0.94
PDLIM4-205ENST00000463615 AIF1P55008 147 aa20.95■□□□□ 0.94
PDLIM4-205ENST00000463615 IL9RQ01113 521 aa20.95■□□□□ 0.94
PDLIM4-205ENST00000463615 SMAD1Q15797 465 aaKnown RBP20.95■□□□□ 0.94
PDLIM4-205ENST00000463615 ZNF284Q2VY69 593 aa20.95■□□□□ 0.94
PDLIM4-205ENST00000463615 ARSIQ5FYB1 569 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms