RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 TRNP1Q6NT89 227 aa18.26■□□□□ 0.51
SSB-206ENST00000461708 ERN2Q76MJ5 926 aaKnown RBP18.26■□□□□ 0.51
SSB-206ENST00000461708 TFAP2DQ7Z6R9 452 aa18.26■□□□□ 0.51
SSB-206ENST00000461708 MARCH9Q86YJ5 346 aa18.26■□□□□ 0.51
SSB-206ENST00000461708 PCDH20Q8N6Y1 951 aaKnown RBP18.26■□□□□ 0.51
SSB-206ENST00000461708 RFFLQ8WZ73 363 aa18.26■□□□□ 0.51
SSB-206ENST00000461708 NXPE2Q96DL1 559 aa18.26■□□□□ 0.51
SSB-206ENST00000461708 IFT43Q96FT9 208 aa18.26■□□□□ 0.51
SSB-206ENST00000461708 ZYG11BQ9C0D3 744 aa18.26■□□□□ 0.51
SSB-206ENST00000461708 NUP62CLQ9H1M0 184 aa18.26■□□□□ 0.51
SSB-206ENST00000461708 IL36AQ9UHA7 158 aa18.26■□□□□ 0.51
SSB-206ENST00000461708 DAAM1Q9Y4D1 1078 aa18.26■□□□□ 0.51
SSB-206ENST00000461708 CBX4O00257 560 aa18.25■□□□□ 0.51
SSB-206ENST00000461708 ZNF821O75541 412 aaPredicted RBP18.25■□□□□ 0.51
SSB-206ENST00000461708 MMP8P22894 467 aa18.25■□□□□ 0.51
SSB-206ENST00000461708 ACP1P24666 158 aa18.25■□□□□ 0.51
SSB-206ENST00000461708 ETFBP38117 255 aa18.25■□□□□ 0.51
SSB-206ENST00000461708 SERPINH1P50454 418 aaKnown RBP18.25■□□□□ 0.51
SSB-206ENST00000461708 ZNF211Q13398 564 aaPredicted RBP18.25■□□□□ 0.51
SSB-206ENST00000461708 COL28A1Q2UY09 1125 aa18.25■□□□□ 0.51
SSB-206ENST00000461708 PROX2Q3B8N5 592 aa18.25■□□□□ 0.51
SSB-206ENST00000461708 TMEM259Q4ZIN3 620 aa18.25■□□□□ 0.51
SSB-206ENST00000461708 FBXL19Q6PCT2 694 aa18.25■□□□□ 0.51
SSB-206ENST00000461708 C19orf48Q6RUI8 117 aa18.25■□□□□ 0.51
SSB-206ENST00000461708 LINGO4Q6UY18 593 aa18.25■□□□□ 0.51
SSB-206ENST00000461708 PDZD3Q86UT5 571 aa18.25■□□□□ 0.51
SSB-206ENST00000461708 ZSCAN30Q86W11 494 aa18.25■□□□□ 0.51
SSB-206ENST00000461708 PLPP6Q8IY26 295 aa18.25■□□□□ 0.51
SSB-206ENST00000461708 ARRDC3Q96B67 414 aa18.25■□□□□ 0.51
SSB-206ENST00000461708 TMPRSS4Q9NRS4 437 aa18.25■□□□□ 0.51
SSB-206ENST00000461708 SAMSN1Q9NSI8 373 aaKnown RBP18.25■□□□□ 0.51
SSB-206ENST00000461708 NOCTQ9UK39 431 aaKnown RBP18.25■□□□□ 0.51
SSB-206ENST00000461708 MYLKQ15746 1914 aa18.24■□□□□ 0.51
SSB-206ENST00000461708 GOLGA8SH3BPF8 625 aa18.24■□□□□ 0.51
SSB-206ENST00000461708 PES1O00541 588 aaKnown RBP18.24■□□□□ 0.51
SSB-206ENST00000461708 SLC31A1O15431 190 aa18.24■□□□□ 0.51
SSB-206ENST00000461708 SRGAP2O75044 1071 aa18.24■□□□□ 0.51
SSB-206ENST00000461708 CYP1A1P04798 512 aaPredicted RBP18.24■□□□□ 0.51
SSB-206ENST00000461708 THEGLP0DJG4 465 aa18.24■□□□□ 0.51
SSB-206ENST00000461708 HOXB3P14651 431 aaPredicted RBP18.24■□□□□ 0.51
SSB-206ENST00000461708 HNRNPA2B1P22626 353 aaKnown RBP18.24■□□□□ 0.51
SSB-206ENST00000461708 ITGB7P26010 798 aa18.24■□□□□ 0.51
SSB-206ENST00000461708 AKT2P31751 481 aa18.24■□□□□ 0.51
SSB-206ENST00000461708 CDR2Q01850 454 aa18.24■□□□□ 0.51
SSB-206ENST00000461708 GNA12Q03113 381 aa18.24■□□□□ 0.51
SSB-206ENST00000461708 HSP90AA4PQ58FG1 418 aa18.24■□□□□ 0.51
SSB-206ENST00000461708 ARSIQ5FYB1 569 aa18.24■□□□□ 0.51
SSB-206ENST00000461708 NAA35Q5VZE5 725 aa18.24■□□□□ 0.51
SSB-206ENST00000461708 DPY19L3Q6ZPD9 716 aa18.24■□□□□ 0.51
SSB-206ENST00000461708 FAM131BQ86XD5 332 aa18.24■□□□□ 0.51
SSB-206ENST00000461708 DCP2Q8IU60 420 aaKnown RBP18.24■□□□□ 0.51
SSB-206ENST00000461708 CHST14Q8NCH0 376 aa18.24■□□□□ 0.51
SSB-206ENST00000461708 OR7D4Q8NG98 312 aa18.24■□□□□ 0.51
SSB-206ENST00000461708 ENOX1Q8TC92 643 aaKnown RBP18.24■□□□□ 0.51
SSB-206ENST00000461708 CPA5Q8WXQ8 436 aa18.24■□□□□ 0.51
SSB-206ENST00000461708 ISG20Q96AZ6 181 aaKnown RBP18.24■□□□□ 0.51
SSB-206ENST00000461708 CFAP57Q96MR6 1250 aa18.24■□□□□ 0.51
SSB-206ENST00000461708 SPON2Q9BUD6 331 aa18.24■□□□□ 0.51
SSB-206ENST00000461708 NRSN2Q9GZP1 204 aa18.24■□□□□ 0.51
SSB-206ENST00000461708 WASF2Q9Y6W5 498 aa18.24■□□□□ 0.51
SSB-206ENST00000461708 PTPRQQ9UMZ3 2332 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 AP1G1O43747 822 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 LEFTY1O75610 366 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 MMEP08473 750 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 PRLRP16471 622 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 ADRA1BP35368 520 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 NEK3P51956 506 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 E2F1Q01094 437 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 RTP5Q14D33 572 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 ARL13BQ3SXY8 428 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 C2CD6Q53TS8 623 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 HES3Q5TGS1 186 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 MANEALQ5VSG8 457 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 KIAA1161Q6NSJ0 714 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 TRIM72Q6ZMU5 477 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 ABI3BPQ7Z7G0 1075 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 SLC25A45Q8N413 288 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 HEPHQ9BQS7 1158 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 OSBPL2Q9H1P3 480 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 GANQ9H2C0 597 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 TNKS2Q9H2K2 1166 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 ATP13A1Q9HD20 1204 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 HS3ST3A1Q9Y663 406 aa18.23■□□□□ 0.51
SSB-206ENST00000461708 TDRD6O60522 2096 aaKnown RBP18.22■□□□□ 0.51
SSB-206ENST00000461708 PCDH8O95206 1070 aa18.22■□□□□ 0.51
SSB-206ENST00000461708 GLDCP23378 1020 aa18.22■□□□□ 0.51
SSB-206ENST00000461708 DGKAP23743 735 aa18.22■□□□□ 0.51
SSB-206ENST00000461708 L1CAMP32004 1257 aa18.22■□□□□ 0.51
SSB-206ENST00000461708 PTPN9P43378 593 aa18.22■□□□□ 0.51
SSB-206ENST00000461708 MAPKAPK2P49137 400 aa18.22■□□□□ 0.51
SSB-206ENST00000461708 GEMIN4P57678 1058 aaKnown RBP18.22■□□□□ 0.51
SSB-206ENST00000461708 RPS21P63220 83 aaKnown RBP18.22■□□□□ 0.51
SSB-206ENST00000461708 ARF5P84085 180 aa18.22■□□□□ 0.51
SSB-206ENST00000461708 TARDBPQ13148 414 aaKnown RBP eCLIP18.22■□□□□ 0.51
SSB-206ENST00000461708 CARD16Q5EG05 197 aa18.22■□□□□ 0.51
SSB-206ENST00000461708 CDKAL1Q5VV42 579 aa18.22■□□□□ 0.51
SSB-206ENST00000461708 CLEC17AQ6ZS10 378 aa18.22■□□□□ 0.51
SSB-206ENST00000461708 STRADAQ7RTN6 431 aa18.22■□□□□ 0.51
SSB-206ENST00000461708 OR4C6Q8NH72 309 aa18.22■□□□□ 0.51
SSB-206ENST00000461708 GRIN3AQ8TCU5 1115 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms