RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 BTBD3Q9Y2F9 522 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 FAM208BQ5VWN6 2430 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 ARID1BQ8NFD5 2236 aaPredicted RBP14.26□□□□□ -0.13
USP4-206ENST00000461553 FREM2Q5SZK8 3169 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 A0A1W2PR77 199 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 KCNK3O14649 394 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 MAGEC1O60732 1142 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 KRT37O76014 449 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 WNT1P04628 370 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 ATP1A3P13637 1013 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 FERP16591 822 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 ADRA1BP35368 520 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 ARRB1P49407 418 aaPredicted RBP14.25□□□□□ -0.13
USP4-206ENST00000461553 HDAC4P56524 1084 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 ARF5P84085 180 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 PTP4A2Q12974 167 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 RAB6CQ53S08 254 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 PIP5KL1Q5T9C9 394 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 MANEALQ5VSG8 457 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 MON1BQ7L1V2 547 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 APTXQ7Z2E3 356 aaKnown RBP14.25□□□□□ -0.13
USP4-206ENST00000461553 OXR1Q8N573 874 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 PCDH20Q8N6Y1 951 aaKnown RBP14.25□□□□□ -0.13
USP4-206ENST00000461553 CCDC185Q8N715 623 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 PNPLA1Q8N8W4 532 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 TMIEQ8NEW7 156 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 NTAN1Q96AB6 310 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 AGPAT1Q99943 283 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 RAB6CQ9H0N0 254 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 HSD3B7Q9H2F3 369 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 TNKS2Q9H2K2 1166 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 RETREG1Q9H6L5 497 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 TMEM63CQ9P1W3 806 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 FTSJ1Q9UET6 329 aa14.25□□□□□ -0.13
USP4-206ENST00000461553 LRRC10BA6NIK2 292 aa14.24□□□□□ -0.13
USP4-206ENST00000461553 GOLGA8CPA6NN73 597 aa14.24□□□□□ -0.13
USP4-206ENST00000461553 SMAD6O43541 496 aaKnown RBP14.24□□□□□ -0.13
USP4-206ENST00000461553 LRIG2O94898 1065 aa14.24□□□□□ -0.13
USP4-206ENST00000461553 RHOQP17081 205 aa14.24□□□□□ -0.13
USP4-206ENST00000461553 GEMIN4P57678 1058 aaKnown RBP14.24□□□□□ -0.13
USP4-206ENST00000461553 NXPH1P58417 271 aa14.24□□□□□ -0.13
USP4-206ENST00000461553 C1QBPQ07021 282 aaKnown RBP14.24□□□□□ -0.13
USP4-206ENST00000461553 SLC20A2Q08357 652 aa14.24□□□□□ -0.13
USP4-206ENST00000461553 EFHC2Q5JST6 749 aa14.24□□□□□ -0.13
USP4-206ENST00000461553 MFSD2AQ8NA29 543 aa14.24□□□□□ -0.13
USP4-206ENST00000461553 KDF1Q8NAX2 398 aaPredicted RBP14.24□□□□□ -0.13
USP4-206ENST00000461553 CHST14Q8NCH0 376 aa14.24□□□□□ -0.13
USP4-206ENST00000461553 CENPIQ92674 756 aaPredicted RBP14.24□□□□□ -0.13
USP4-206ENST00000461553 ARRDC3Q96B67 414 aa14.24□□□□□ -0.13
USP4-206ENST00000461553 MCEEQ96PE7 176 aa14.24□□□□□ -0.13
USP4-206ENST00000461553 BPIFA3Q9BQP9 254 aa14.24□□□□□ -0.13
USP4-206ENST00000461553 OSBPL2Q9H1P3 480 aa14.24□□□□□ -0.13
USP4-206ENST00000461553 TMEM248Q9NWD8 314 aa14.24□□□□□ -0.13
USP4-206ENST00000461553 ZMIZ1Q9ULJ6 1067 aa14.24□□□□□ -0.13
USP4-206ENST00000461553 HPCAL4Q9UM19 191 aa14.24□□□□□ -0.13
USP4-206ENST00000461553 FCF1Q9Y324 198 aaKnown RBP14.24□□□□□ -0.13
USP4-206ENST00000461553 PKD1L2Q7Z442 2459 aa14.24□□□□□ -0.13
USP4-206ENST00000461553 ZZEF1O43149 2961 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 CXorf51AA0A1B0GTR3 108 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 SMTNL1A8MU46 457 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 PRAMEF26H0Y7S4 382 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 TLR4O00206 839 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 WNT9AO14904 365 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 CCP110O43303 1012 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 TNFSF14O43557 240 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 RAMP2O60895 175 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 RNGTTO60942 597 aaKnown RBP14.23□□□□□ -0.13
USP4-206ENST00000461553 LEFTY1O75610 366 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 ZMPSTE24O75844 475 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 ITGAVP06756 1048 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 PLEKP08567 350 aaPredicted RBP14.23□□□□□ -0.13
USP4-206ENST00000461553 EPHA8P29322 1005 aaPredicted RBP14.23□□□□□ -0.13
USP4-206ENST00000461553 RFC1P35251 1148 aaPredicted RBP14.23□□□□□ -0.13
USP4-206ENST00000461553 DNA2P51530 1060 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 NEK3P51956 506 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 SCAPQ12770 1279 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 OVGP1Q12889 678 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 STAT4Q14765 748 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 FILIP1LQ4L180 1135 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 ARTNQ5T4W7 220 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 PPP1R2P3Q6NXS1 205 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 CAVIN1Q6NZI2 390 aaKnown RBP14.23□□□□□ -0.13
USP4-206ENST00000461553 NEK5Q6P3R8 708 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 DPY19L3Q6ZPD9 716 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 ERN2Q76MJ5 926 aaKnown RBP14.23□□□□□ -0.13
USP4-206ENST00000461553 SLCO6A1Q86UG4 719 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 IQCHQ86VS3 1027 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 NLRP14Q86W24 1093 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 ZNF354CQ86Y25 554 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 GATAD2AQ86YP4 633 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 HDAC8Q9BY41 377 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 TM6SF2Q9BZW4 377 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 ZDHHC6Q9H6R6 413 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 ARHGAP20Q9P2F6 1191 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 DNAI1Q9UI46 699 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 MYO6Q9UM54 1294 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 NEU3Q9UQ49 428 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 CHD6Q8TD26 2715 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 KNTC1P50748 2209 aa14.23□□□□□ -0.13
USP4-206ENST00000461553 ZFHX4Q86UP3 3567 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms