RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 NDNQ99608 321 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 CREBZFQ9NS37 354 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 UBP1Q9NZI7 540 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 COPG2Q9UBF2 871 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 RPS6KL1Q9Y6S9 549 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 BIRC5O15392 142 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 ZNF623O75123 536 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 DDHD2O94830 711 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 JUNP05412 331 aaKnown RBP12.64□□□□□ -0.39
LINC00959-201ENST00000456581 TPH1P17752 444 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 VCLP18206 1134 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 MAGEA6P43360 314 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 GLRBP48167 497 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 PKNOX1P55347 436 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 TMCO4Q5TGY1 634 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 ARCQ7LC44 396 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 DCLK2Q8N568 766 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 SNX31Q8N9S9 440 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 B4GALNT2Q8NHY0 566 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 EZH1Q92800 747 aaPredicted RBP12.64□□□□□ -0.39
LINC00959-201ENST00000456581 P2RY11Q96G91 374 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 QKIQ96PU8 341 aaKnown RBP eCLIP12.64□□□□□ -0.39
LINC00959-201ENST00000456581 SLC2A13Q96QE2 648 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 TSPAN18Q96SJ8 248 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 SNX15Q9NRS6 342 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 IRAK4Q9NWZ3 460 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 PCDH10Q9P2E7 1040 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 HCSTQ9UBK5 93 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 SF3B1O75533 1304 aaKnown RBP eCLIP12.63□□□□□ -0.39
LINC00959-201ENST00000456581 H3BNX3 289 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 CKBP12277 381 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 SCNN1AP37088 669 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 RANBP1P43487 201 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 SEMA5AQ13591 1074 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 TLR1Q15399 786 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 TMEM86AQ8N2M4 240 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 GRIN3AQ8TCU5 1115 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 LINC01599Q8WXQ3 324 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 B3GALT6Q96L58 329 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 PRDM12Q9H4Q4 367 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 CDH9Q9ULB4 789 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 PRG3Q9Y2Y8 225 aaPredicted RBP12.63□□□□□ -0.39
LINC00959-201ENST00000456581 TSC2P49815 1807 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 CFLARO15519 480 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 SERPINE1P05121 402 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 GSTA2P09210 222 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 ATP6V1B1P15313 513 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 TCN1P20061 433 aaPredicted RBP12.63□□□□□ -0.39
LINC00959-201ENST00000456581 MPSTP25325 297 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 EPHA3P29320 983 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 ADRA1BP35368 520 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 AVPR1AP37288 418 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 CDK7P50613 346 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 ABCE1P61221 599 aaKnown RBP12.63□□□□□ -0.39
LINC00959-201ENST00000456581 TBC1D25Q3MII6 688 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 KYAT3Q6YP21 454 aaKnown RBP12.63□□□□□ -0.39
LINC00959-201ENST00000456581 BNIPLQ7Z465 357 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 NPWQ8N729 165 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 MFSD3Q96ES6 412 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 CAPNS2Q96L46 248 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 LENG8Q96PV6 779 aaPredicted RBP12.63□□□□□ -0.39
LINC00959-201ENST00000456581 DDX18Q9NVP1 670 aaKnown RBP12.63□□□□□ -0.39
LINC00959-201ENST00000456581 MKS1Q9NXB0 559 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 DNAJB4Q9UDY4 337 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 APPL1Q9UKG1 709 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 STAP1Q9ULZ2 295 aa12.63□□□□□ -0.39
LINC00959-201ENST00000456581 TK2O00142 265 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 EEF2KO00418 725 aaKnown RBP12.62□□□□□ -0.39
LINC00959-201ENST00000456581 ATP9BO43861 1147 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 TPSB2P20231 275 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 RPL10P27635 214 aaKnown RBP12.62□□□□□ -0.39
LINC00959-201ENST00000456581 TPSAB1Q15661 275 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 MMEL1Q495T6 779 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 HSP90AA5PQ58FG0 334 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 ZNF567Q8N184 647 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 METTL25Q8N6Q8 603 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 RSPH1Q8WYR4 309 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 SMARCD1Q96GM5 515 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 OLFM3Q96PB7 478 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 TRAPPC9Q96Q05 1148 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 C1orf21Q9H246 121 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 PDP2Q9P2J9 529 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 A0A0A0MRY4 1105 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 GLRA3O75311 464 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 ODC1P11926 461 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 ZFXP17010 805 aaPredicted RBP12.62□□□□□ -0.39
LINC00959-201ENST00000456581 ERCC2P18074 760 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 RPL9P32969 192 aaKnown RBP12.62□□□□□ -0.39
LINC00959-201ENST00000456581 NUDT2P50583 147 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 MRPS22P82650 360 aaKnown RBP12.62□□□□□ -0.39
LINC00959-201ENST00000456581 HTRA3P83110 453 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 TUSC3Q13454 348 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 ZNF460Q14592 562 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 RAB41Q5JT25 222 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 CLLU1OSQ5K130 101 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 OVOS1Q6IE37 1185 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 PGM2L1Q6PCE3 622 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 IYDQ6PHW0 289 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 ZNF598Q86UK7 904 aaKnown RBP12.62□□□□□ -0.39
LINC00959-201ENST00000456581 PPP4R1Q8TF05 950 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms