RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 ADAMTS4O75173 837 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 SIN3BO75182 1162 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 SMIM24O75264 130 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 TYMPP19971 482 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 THOC5Q13769 683 aaKnown RBP18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 GRM3Q14832 879 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 PCID2Q5JVF3 399 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 SNX30Q5VWJ9 437 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 DENND5AQ6IQ26 1287 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 PKN3Q6P5Z2 889 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 SCD5Q86SK9 330 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 ZC3HC1Q86WB0 502 aaKnown RBP18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 FAM161BQ96MY7 647 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 TSC22D3Q99576 134 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 SH3GL3Q99963 347 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 ADAM2Q99965 735 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 TBL1YQ9BQ87 522 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 SLC39A8Q9C0K1 460 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 NMRAL1Q9HBL8 299 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 CA12O43570 354 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 SLC34A1Q06495 639 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 C11orf91Q3C1V1 193 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 MFSD14CQ5VZR4 134 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 BTBD8Q5XKL5 378 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 APLFQ8IW19 511 aaPredicted RBP18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 ULK2Q8IYT8 1036 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 ATPAF2Q8N5M1 289 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 LZTR1Q8N653 840 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 NRG4Q8WWG1 115 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 CASP10Q92851 521 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 C1QTNF1Q9BXJ1 281 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 OXCT2Q9BYC2 517 aaPredicted RBP18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 STX18Q9P2W9 335 aaKnown RBP18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 ANKRD6Q9Y2G4 727 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 INPP5FQ9Y2H2 1132 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 GOLGA8TH3BQL2 631 aa18.67■□□□□ 0.58
SEMA3B-209ENST00000456560 MATN3O15232 486 aa18.67■□□□□ 0.58
SEMA3B-209ENST00000456560 AHCYL1O43865 530 aa18.67■□□□□ 0.58
SEMA3B-209ENST00000456560 TBX10O75333 385 aa18.67■□□□□ 0.58
SEMA3B-209ENST00000456560 ANXA9O76027 345 aa18.67■□□□□ 0.58
SEMA3B-209ENST00000456560 FESP07332 822 aa18.67■□□□□ 0.58
SEMA3B-209ENST00000456560 SLC5A3P53794 718 aa18.67■□□□□ 0.58
SEMA3B-209ENST00000456560 TSPY1Q01534 308 aa18.67■□□□□ 0.58
SEMA3B-209ENST00000456560 ANO4Q32M45 955 aa18.67■□□□□ 0.58
SEMA3B-209ENST00000456560 THEMIS2Q5TEJ8 643 aa18.67■□□□□ 0.58
SEMA3B-209ENST00000456560 AFMIDQ63HM1 303 aa18.67■□□□□ 0.58
SEMA3B-209ENST00000456560 IRGCQ6NXR0 463 aa18.67■□□□□ 0.58
SEMA3B-209ENST00000456560 TMEM151AQ8N4L1 468 aa18.67■□□□□ 0.58
SEMA3B-209ENST00000456560 THTPAQ9BU02 230 aa18.67■□□□□ 0.58
SEMA3B-209ENST00000456560 RHOJQ9H4E5 214 aa18.67■□□□□ 0.58
SEMA3B-209ENST00000456560 CATSPERBQ9H7T0 1116 aa18.67■□□□□ 0.58
SEMA3B-209ENST00000456560 SFMBT1Q9UHJ3 866 aa18.67■□□□□ 0.58
SEMA3B-209ENST00000456560 CDY1Q9Y6F8 540 aa18.67■□□□□ 0.58
SEMA3B-209ENST00000456560 F8W810 466 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 INPPL1O15357 1258 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 TRIM13O60858 407 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 MT-CYBP00156 380 aaPredicted RBP18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 GABRB3P28472 473 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 CCR1P32246 355 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 ADRA1AP35348 466 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 PPP2R5DQ14738 602 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 VWA5B1Q5TIE3 1220 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 EPGNQ6UW88 154 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 ZNF598Q86UK7 904 aaKnown RBP18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 CCDC117Q8IWD4 279 aaPredicted RBP18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 SCG3Q8WXD2 468 aaKnown RBP18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 CLPTM1LQ96KA5 538 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 FCRL2Q96LA5 508 aaPredicted RBP18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 LBHD1Q9BQE6 289 aaPredicted RBP18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 CDH19Q9H159 772 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 VCXQ9H320 206 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 DLGAP2Q9P1A6 1054 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 SLC7A8Q9UHI5 535 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 SLC39A10Q9ULF5 831 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 SEPT4O43236 478 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 MSI1O43347 362 aaKnown RBP18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 H2AFYO75367 372 aaKnown RBP18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 ASGR1P07306 291 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 SP100P23497 879 aaPredicted RBP18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 ZRSR2Q15696 482 aaKnown RBP18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 TRMT5Q32P41 509 aaKnown RBP18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 SPATA2LQ8IUW3 424 aaPredicted RBP18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 CNTN4Q8IWV2 1026 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 ZNF781Q8N8C0 355 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 STMN2Q93045 179 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 FAM136AQ96C01 138 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 NMUR1Q9HB89 426 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 NDFIP2Q9NV92 336 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 OXSMQ9NWU1 459 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 GABRQQ9UN88 632 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 LRCH1Q9Y2L9 728 aa18.66■□□□□ 0.58
SEMA3B-209ENST00000456560 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 KCNU1A8MYU2 1149 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 APOA4P06727 396 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 SBK3P0C264 359 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 SKIP12755 728 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 VEGFBP49765 207 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 TRIM32Q13049 653 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms