RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 SLITRK4Q8IW52 837 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 EEF1AKMT1Q8WVE0 214 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 PAFAH2Q99487 392 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 REEP2Q9BRK0 252 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 AIFM2Q9BRQ8 373 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 FAIM2Q9BWQ8 316 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 HDHD2Q9H0R4 259 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 XKR8Q9H6D3 395 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 PCDH18Q9HCL0 1135 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 PCDHB16Q9NRJ7 776 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 RHBDL2Q9NX52 303 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 FADS3Q9Y5Q0 445 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 CYP3A7-CYP3A51PA0A087WV96 503 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 MYO1GB0I1T2 1018 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 SSNA1O43805 119 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 GLI1P08151 1106 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 CYP3A7P24462 503 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 PTGS2P35354 604 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 SLC11A2P49281 568 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 RRP1BQ14684 758 aaKnown RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ARL6IP1Q15041 203 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ACAD10Q6JQN1 1059 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 CHST13Q8NET6 341 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 MCOLN3Q8TDD5 553 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 NXNL1Q96CM4 212 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 CAMK1GQ96NX5 476 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF347Q96SE7 839 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 SHCBP1LQ9BZQ2 653 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 RERGLQ9H628 205 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 EIF2B3Q9NR50 452 aaKnown RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 TMEM94Q12767 1356 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 FGFR4P22455 802 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 CHRNDQ07001 517 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 PTRHD1Q6GMV3 140 aaKnown RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 DENND5AQ6IQ26 1287 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ZPBP2Q6X784 338 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ITCHQ96J02 903 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 C7orf26Q96N11 449 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 TFCP2L1Q9NZI6 479 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 HSPBP1Q9NZL4 362 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 GTF2IRD1Q9UHL9 959 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 KCNIP3Q9Y2W7 256 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 CACNA1AO00555 2505 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 FAM86C2PA6NEL3 165 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 NDUFS2O75306 463 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 GCATO75600 419 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 C6orf222P0C671 652 aaPredicted RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ATP6V1B1P15313 513 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 MAPK10P53779 464 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF45Q02386 682 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ATP1A4Q13733 1029 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 USP17L2Q6R6M4 530 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 TIFAQ96CG3 184 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 C11orf70Q9BRQ4 267 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF670Q9BS34 389 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 SLC2A11Q9BYW1 496 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 SIK2Q9H0K1 926 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 DHX35Q9H5Z1 703 aaKnown RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 WDR70Q9NW82 654 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 HDAC3O15379 428 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 KHDRBS3O75525 346 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 GNAZP19086 355 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 NPR2P20594 1047 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 IL4RP24394 825 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 FOLH1Q04609 750 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 PTP4A2Q12974 167 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF268Q14587 947 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 MYBPC3Q14896 1274 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 NR1D2Q14995 579 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 SLC25A24Q6NUK1 477 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 CNSTQ6PJW8 725 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 OR8H2Q8N162 312 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 PHF10Q8WUB8 498 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 C12orf65Q9H3J6 166 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 KDM6BO15054 1643 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 LAMB2P55268 1798 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 SUPT3HB4E1H0 165 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 RPS12P25398 132 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 S100A7P31151 101 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 PGAP1Q75T13 922 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 TAS2R42Q7RTR8 314 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 DEFB107AQ8IZN7 70 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 ZBTB10Q96DT7 871 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF496Q96IT1 587 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 RANBP3Q9H6Z4 567 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 MTF2Q9Y483 593 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 PCDHB6Q9Y5E3 794 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 PPP2R3BQ9Y5P8 575 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 NARSO43776 548 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 GRAP2O75791 330 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 RAD17O75943 681 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 GTF2E2P29084 291 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 CDK9P50750 372 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 C3P1Q6ZMU1 363 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 PID1Q7Z2X4 250 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 CPXCR1Q8N123 301 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 OR6B3Q8NGW1 331 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 GDF3Q9NR23 364 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.27□□□□□ -1.573e-30■■■■■ 247.4
CSMD3-204ENST00000455883 KANSL3Q9P2N6 904 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms