RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 ZNF683Q8IZ20 524 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 KLK6Q92876 244 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 GRAMD1AQ96CP6 724 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 PPP1R13BQ96KQ4 1090 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 BMFQ96LC9 184 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 FAM81BQ96LP2 452 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 CCDC114Q96M63 670 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 NOX5Q96PH1 765 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 PSMB7Q99436 277 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 C2orf49Q9BVC5 232 aaPredicted RBP11.94□□□□□ -0.5
HERC3-207ENST00000452979 DUSP23Q9BVJ7 150 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 CALN1Q9BXU9 219 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 ASCL3Q9NQ33 180 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 EVA1BQ9NVM1 165 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 ZFR2Q9UPR6 939 aaKnown RBP11.94□□□□□ -0.5
HERC3-207ENST00000452979 FARP1Q9Y4F1 1045 aaPredicted RBP11.94□□□□□ -0.5
HERC3-207ENST00000452979 FLNBO75369 2602 aaKnown RBP11.93□□□□□ -0.5
HERC3-207ENST00000452979 SYNJ2BP-COX16A0A087WUM0 186 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 DRGXA6NNA5 263 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 BECN2A8MW95 431 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 J3QKU1 62 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 K7ERQ8 282 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 K7ESM1 405 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 SMAD6O43541 496 aaKnown RBP11.93□□□□□ -0.5
HERC3-207ENST00000452979 BNIP3LO60238 219 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 ZNF821O75541 412 aaPredicted RBP11.93□□□□□ -0.5
HERC3-207ENST00000452979 CNTN5O94779 1100 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 MYF5P13349 255 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 NOS2P35228 1153 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 CLCN6P51797 869 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 CLDN2P57739 230 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 SKOR1P84550 965 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 ANO6Q4KMQ2 910 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 ARSIQ5FYB1 569 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 KLHL10Q6JEL2 608 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 Q6ZSR6 202 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 ERN2Q76MJ5 926 aaKnown RBP11.93□□□□□ -0.5
HERC3-207ENST00000452979 MLKLQ8NB16 471 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 ATP11CQ8NB49 1132 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 CHST14Q8NCH0 376 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 C1orf74Q96LT6 269 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 CPXM1Q96SM3 734 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 MYOCQ99972 504 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 ABCG4Q9H172 646 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 MUC3BQ9H195 1237 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 CAAP1Q9H8G2 361 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 CPNE5Q9HCH3 593 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 FZD3Q9NPG1 666 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 ANO10Q9NW15 660 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 ARHGEF38Q9NXL2 777 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 COX16Q9P0S2 106 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 VPS51Q9UID3 782 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 PCDHGC3Q9UN70 934 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.93□□□□□ -0.5
HERC3-207ENST00000452979 CSNK1G3Q9Y6M4 447 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 TRPM6Q9BX84 2022 aa11.93□□□□□ -0.5
HERC3-207ENST00000452979 DOCK4Q8N1I0 1966 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 SPTY2D1-AS1A0A0U1RR47 76 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 BICDL2A1A5D9 508 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 A6NNZ2 444 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 I6L893 689 aaPredicted RBP11.92□□□□□ -0.5
HERC3-207ENST00000452979 M0QYT0 321 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 SNAP91O60641 907 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 PCDH8O95206 1070 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 CSF2P04141 144 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 CXCR3P49682 368 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 HNRNPKP61978 463 aaKnown RBP eCLIP11.92□□□□□ -0.5
HERC3-207ENST00000452979 RPS21P63220 83 aaKnown RBP11.92□□□□□ -0.5
HERC3-207ENST00000452979 SLC6A3Q01959 620 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 PAK1Q13153 545 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 NME3Q13232 169 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 FZD2Q14332 565 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 ISXQ2M1V0 245 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 ALFQ53S48 1182 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 TAF1BQ53T94 588 aaPredicted RBP11.92□□□□□ -0.5
HERC3-207ENST00000452979 ARTNQ5T4W7 220 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 ACBD5Q5T8D3 534 aaPredicted RBP11.92□□□□□ -0.5
HERC3-207ENST00000452979 OTUD1Q5VV17 481 aaPredicted RBP11.92□□□□□ -0.5
HERC3-207ENST00000452979 SEL1L3Q68CR1 1132 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 ZCCHC8Q6NZY4 707 aaKnown RBP11.92□□□□□ -0.5
HERC3-207ENST00000452979 OLFML1Q6UWY5 402 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 FAM183BPQ6ZVS7 135 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 SETD3Q86TU7 594 aaPredicted RBP11.92□□□□□ -0.5
HERC3-207ENST00000452979 ZNF397Q8NF99 534 aaPredicted RBP11.92□□□□□ -0.5
HERC3-207ENST00000452979 IFI44Q8TCB0 444 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 KCNE4Q8WWG9 221 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 NELFBQ8WX92 580 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 TTC9Q92623 222 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 NT5C3BQ969T7 300 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 NAF1Q96HR8 494 aaKnown RBP11.92□□□□□ -0.5
HERC3-207ENST00000452979 SLC46A1Q96NT5 459 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 NPY6RQ99463 290 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 SLC17A9Q9BYT1 436 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 ANLNQ9NQW6 1124 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 DYRK4Q9NR20 520 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 THSD1Q9NS62 852 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 TMEM51Q9NW97 253 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 DNAJC28Q9NX36 388 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 RRN3Q9NYV6 651 aa11.92□□□□□ -0.5
HERC3-207ENST00000452979 NCKIPSDQ9NZQ3 722 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms