RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 KRT38O76015 456 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 PAPLNO95428 1278 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 EPHB2P29323 1055 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 CD68P34810 354 aaPredicted RBP10.93□□□□□ -0.66
PKP4-206ENST00000452162 SERPINB6P35237 376 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 GARSP41250 739 aaKnown RBP10.93□□□□□ -0.66
PKP4-206ENST00000452162 PGFP49763 221 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 SERPINB9P50453 376 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 SESN2P58004 480 aaPredicted RBP10.93□□□□□ -0.66
PKP4-206ENST00000452162 TWF1Q12792 350 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 BMPR2Q13873 1038 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 CBX2Q14781 532 aaPredicted RBP10.93□□□□□ -0.66
PKP4-206ENST00000452162 SMAD2Q15796 467 aaKnown RBP10.93□□□□□ -0.66
PKP4-206ENST00000452162 FAM133BQ5BKY9 247 aaKnown RBP10.93□□□□□ -0.66
PKP4-206ENST00000452162 OTOAQ7RTW8 1153 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 SCD5Q86SK9 330 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 UNC5BQ8IZJ1 945 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 FITM2Q8N6M3 262 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 GBP7Q8N8V2 638 aaPredicted RBP10.93□□□□□ -0.66
PKP4-206ENST00000452162 DEPDC1BQ8WUY9 529 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 TTC17Q96AE7 1141 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 FAM111AQ96PZ2 611 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 NAT9Q9BTE0 207 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 GBA3Q9H227 469 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 SMOC2Q9H3U7 446 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 POMKQ9H5K3 350 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 ABCC13Q9NSE7 274 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 PIH1D1Q9NWS0 290 aaKnown RBP10.93□□□□□ -0.66
PKP4-206ENST00000452162 HCFC1R1Q9NWW0 138 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 SYBUQ9NX95 663 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 YIPF1Q9Y548 306 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 GREB1Q4ZG55 1949 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 MYO16Q9Y6X6 1858 aa10.93□□□□□ -0.66
PKP4-206ENST00000452162 MYO18AQ92614 2054 aaKnown RBP10.93□□□□□ -0.66
PKP4-206ENST00000452162 WDR91A4D1P6 747 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 COPEO14579 308 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 ZBTB24O43167 697 aaPredicted RBP10.92□□□□□ -0.66
PKP4-206ENST00000452162 RASSF9O75901 435 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 AP2A1O95782 977 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 HNRNPA1P09651 372 aaKnown RBP eCLIP10.92□□□□□ -0.66
PKP4-206ENST00000452162 GRIK1P39086 918 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 CCDC15Q0P6D6 951 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 BNIP1Q12981 228 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 ZBTB17Q13105 803 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 CRYMQ14894 314 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 NFE2Q16621 373 aaPredicted RBP10.92□□□□□ -0.66
PKP4-206ENST00000452162 BRMS1LQ5PSV4 323 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 ATAT1Q5SQI0 421 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 KCTD11Q693B1 232 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 CASC4Q6P4E1 433 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 TIFABQ6ZNK6 161 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 CDHR3Q6ZTQ4 885 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 ZSCAN18Q8TBC5 510 aaPredicted RBP10.92□□□□□ -0.66
PKP4-206ENST00000452162 SPPL2BQ8TCT7 592 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 C10orf82Q8WW14 230 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 PTPRN2Q92932 1015 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 SRPK1Q96SB4 655 aaKnown RBP10.92□□□□□ -0.66
PKP4-206ENST00000452162 SEPT5Q99719 369 aaPredicted RBP10.92□□□□□ -0.66
PKP4-206ENST00000452162 PIDD1Q9HB75 910 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 SLC40A1Q9NP59 571 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 MAFFQ9ULX9 164 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 PCDHB5Q9Y5E4 795 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 LRG1P02750 347 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 HOXA9P31269 272 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 HOXC13P31276 330 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 NTHL1P78549 312 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 SMARCB1Q12824 385 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 NAB1Q13506 487 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 PUS10Q3MIT2 529 aaKnown RBP10.92□□□□□ -0.66
PKP4-206ENST00000452162 MGAT5BQ3V5L5 792 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 MANEALQ5VSG8 457 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 RTL10Q7L3V2 364 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 GRASPQ7Z6J2 395 aaPredicted RBP10.92□□□□□ -0.66
PKP4-206ENST00000452162 C2orf15Q8WU43 125 aaKnown RBP10.92□□□□□ -0.66
PKP4-206ENST00000452162 RNF34Q969K3 372 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 HAPLN3Q96S86 360 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 MLPHQ9BV36 600 aaPredicted RBP10.92□□□□□ -0.66
PKP4-206ENST00000452162 MANSC1Q9H8J5 431 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 CASS4Q9NQ75 786 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 TRHDEQ9UKU6 1024 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 TRIOO75962 3097 aa10.92□□□□□ -0.66
PKP4-206ENST00000452162 HAPLN1P10915 354 aaPredicted RBP10.91□□□□□ -0.66
PKP4-206ENST00000452162 SP100P23497 879 aaPredicted RBP10.91□□□□□ -0.66
PKP4-206ENST00000452162 CNTFP26441 200 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 MTHFRP42898 656 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 SERPINB4P48594 390 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 GPR15P49685 360 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 NCALDP61601 193 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 ZNF33AQ06730 810 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 OLIG2Q13516 323 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 TEX44Q53QW1 395 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 TJAP1Q5JTD0 557 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 BTBD8Q5XKL5 378 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 OR52K1Q8NGK4 314 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 THOC1Q96FV9 657 aaKnown RBP10.91□□□□□ -0.66
PKP4-206ENST00000452162 RIPOR3Q96MK2 946 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 VAT1Q99536 393 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 NMUR1Q9HB89 426 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 DNMT3BQ9UBC3 853 aaKnown RBP10.91□□□□□ -0.66
PKP4-206ENST00000452162 PLLPQ9Y342 182 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms