RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 CHI3L2Q15782 390 aa16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 ATG16L1Q676U5 607 aa16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 NADSYN1Q6IA69 706 aa16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 ZNF461Q8TAF7 563 aa16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 FCRL5Q96RD9 977 aa16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 AGAP2Q99490 1192 aa16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 SOX13Q9UN79 622 aa16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 KIAA1671Q9BY89 1806 aa16.36■□□□□ 0.21
AP000253.1-201ENST00000449339 VGLL3A8MV65 326 aa16.36■□□□□ 0.21
AP000253.1-201ENST00000449339 BIRC5O15392 142 aa16.36■□□□□ 0.21
AP000253.1-201ENST00000449339 ANXA9O76027 345 aa16.36■□□□□ 0.21
AP000253.1-201ENST00000449339 ABLIM3O94929 683 aa16.36■□□□□ 0.21
AP000253.1-201ENST00000449339 BPGMP07738 259 aa16.36■□□□□ 0.21
AP000253.1-201ENST00000449339 DLDP09622 509 aaKnown RBP16.36■□□□□ 0.21
AP000253.1-201ENST00000449339 HMGA1P17096 107 aaKnown RBP16.36■□□□□ 0.21
AP000253.1-201ENST00000449339 KCNJ2P63252 427 aa16.36■□□□□ 0.21
AP000253.1-201ENST00000449339 ELF3P78545 371 aaPredicted RBP16.36■□□□□ 0.21
AP000253.1-201ENST00000449339 HSP90AA5PQ58FG0 334 aa16.36■□□□□ 0.21
AP000253.1-201ENST00000449339 STXBP5Q5T5C0 1151 aa16.36■□□□□ 0.21
AP000253.1-201ENST00000449339 TEDDM1Q5T9Z0 273 aa16.36■□□□□ 0.21
AP000253.1-201ENST00000449339 TIGD7Q6NT04 549 aaPredicted RBP16.36■□□□□ 0.21
AP000253.1-201ENST00000449339 ASRGL1Q7L266 308 aa16.36■□□□□ 0.21
AP000253.1-201ENST00000449339 STRA8Q7Z7C7 330 aa16.36■□□□□ 0.21
AP000253.1-201ENST00000449339 ZYG11BQ9C0D3 744 aa16.36■□□□□ 0.21
AP000253.1-201ENST00000449339 GLOD4Q9HC38 313 aa16.36■□□□□ 0.21
AP000253.1-201ENST00000449339 TXLNGQ9NUQ3 528 aa16.36■□□□□ 0.21
AP000253.1-201ENST00000449339 CCDC195A0A1B0GUA6 201 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 WASH4PA8MWX3 477 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 GLRA3O75311 464 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 TYK2P29597 1187 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 MTDHQ86UE4 582 aaKnown RBP16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 KCNMB4Q86W47 210 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 LRRC49Q8IUZ0 686 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 KIF2BQ8N4N8 673 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 RAB3IL1Q8TBN0 382 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 HMCESQ96FZ2 354 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 C7orf26Q96N11 449 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 RBBP8Q99708 897 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 HERC2P3Q9BVR0 1158 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 KCNK13Q9HB14 408 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 C20orf96Q9NUD7 363 aaPredicted RBP16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 RBM22Q9NW64 420 aaKnown RBP eCLIP16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 SPG21Q9NZD8 308 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 DCDC2Q9UHG0 476 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 TRIM33Q9UPN9 1127 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 YIPF1Q9Y548 306 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 ZNF840PA6NDX5 716 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 KIAA0355O15063 1070 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 HSPA8P11142 646 aaKnown RBP16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 NQO1P15559 274 aaKnown RBP16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 RHOQP17081 205 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 SPRP35270 261 aaPredicted RBP16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 ARFIP2P53365 341 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 LIMK2P53671 638 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 IRX4P78413 519 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 PLD1Q13393 1074 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 N4BP2L1Q5TBK1 243 aaPredicted RBP16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 CES4AQ5XG92 561 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 IPMKQ8NFU5 416 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 ATXN7L3BQ96GX2 97 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 YME1L1Q96TA2 773 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 TBL1YQ9BQ87 522 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 ARHGEF3Q9NR81 526 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 FNIP2Q9P278 1114 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 IPO11Q9UI26 975 aaKnown RBP16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 EMCNQ9ULC0 261 aa16.35■□□□□ 0.21
AP000253.1-201ENST00000449339 GSRP00390 522 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 HLA-DQB2P05538 268 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 LAG3P18627 525 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 TARSP26639 723 aaKnown RBP16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 NMBRP28336 390 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 LBX1P52954 281 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 TAF1BQ53T94 588 aaPredicted RBP16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 PPM1JQ5JR12 505 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 FSTL4Q6MZW2 842 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 C16orf46Q6P387 395 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 NECAB2Q7Z6G3 386 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 PARP9Q8IXQ6 854 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 UMODL1-AS1Q8N2C9 162 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 DCLK2Q8N568 766 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 ZNF778Q96MU6 729 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 RPRD1AQ96P16 312 aaPredicted RBP16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 KIFC1Q9BW19 673 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 NACA2Q9H009 215 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 SNX15Q9NRS6 342 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 TMEM248Q9NWD8 314 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 ZFP69BQ9UJL9 534 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 BPTFQ12830 3046 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 IGLV3-10A0A075B6K4 115 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 J3KR12 359 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 COCHO43405 550 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 MGRN1O60291 552 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 ATP5HO75947 161 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 NEBLO76041 1014 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 URODP06132 367 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 F7P08709 466 aaPredicted RBP16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 SPATA31D3P0C874 917 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 ATP5C1P36542 298 aaKnown RBP16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 OCRLQ01968 901 aa16.34■□□□□ 0.21
AP000253.1-201ENST00000449339 RING1Q06587 406 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms