RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 THTPAQ9BU02 230 aa15.05■□□□□ -0
SF1-211ENST00000448404 THAP1Q9NVV9 213 aa15.05■□□□□ -0
SF1-211ENST00000448404 FIS1Q9Y3D6 152 aa15.05■□□□□ -0
SF1-211ENST00000448404 TDRD15B5MCY1 1934 aaKnown RBP15.05■□□□□ -0
SF1-211ENST00000448404 CAPN14A8MX76 684 aa15.04■□□□□ -0
SF1-211ENST00000448404 TMEM233B4DJY2 109 aa15.04■□□□□ -0
SF1-211ENST00000448404 KLF11O14901 512 aa15.04■□□□□ -0
SF1-211ENST00000448404 TGDSO95455 350 aa15.04■□□□□ -0
SF1-211ENST00000448404 F9P00740 461 aa15.04■□□□□ -0
SF1-211ENST00000448404 GSTA2P09210 222 aa15.04■□□□□ -0
SF1-211ENST00000448404 LIMK2P53671 638 aa15.04■□□□□ -0
SF1-211ENST00000448404 SLC10A7Q0GE19 358 aa15.04■□□□□ -0
SF1-211ENST00000448404 SPANXN3Q5MJ09 141 aa15.04■□□□□ -0
SF1-211ENST00000448404 FAM171A1Q5VUB5 890 aa15.04■□□□□ -0
SF1-211ENST00000448404 TIFABQ6ZNK6 161 aa15.04■□□□□ -0
SF1-211ENST00000448404 THEM5Q8N1Q8 247 aa15.04■□□□□ -0
SF1-211ENST00000448404 SUSD3Q96L08 255 aa15.04■□□□□ -0
SF1-211ENST00000448404 CPNE1Q99829 537 aa15.04■□□□□ -0
SF1-211ENST00000448404 NT5MQ9NPB1 228 aa15.04■□□□□ -0
SF1-211ENST00000448404 SPATS2LQ9NUQ6 558 aaKnown RBP15.04■□□□□ -0
SF1-211ENST00000448404 A0A0U1RQS6 177 aa15.04■□□□□ -0
SF1-211ENST00000448404 CCDC22O60826 627 aa15.04■□□□□ -0
SF1-211ENST00000448404 IGLV3-25P01717 112 aa15.04■□□□□ -0
SF1-211ENST00000448404 TPBGLP0DKB5 382 aa15.04■□□□□ -0
SF1-211ENST00000448404 RPL17P18621 184 aaKnown RBP15.04■□□□□ -0
SF1-211ENST00000448404 MX2P20592 715 aa15.04■□□□□ -0
SF1-211ENST00000448404 MPSTP25325 297 aa15.04■□□□□ -0
SF1-211ENST00000448404 CCR1P32246 355 aa15.04■□□□□ -0
SF1-211ENST00000448404 SERPINB6P35237 376 aa15.04■□□□□ -0
SF1-211ENST00000448404 TUBB3Q13509 450 aa15.04■□□□□ -0
SF1-211ENST00000448404 THOC5Q13769 683 aaKnown RBP15.04■□□□□ -0
SF1-211ENST00000448404 USP10Q14694 798 aaKnown RBP15.04■□□□□ -0
SF1-211ENST00000448404 TCTN1Q2MV58 587 aa15.04■□□□□ -0
SF1-211ENST00000448404 SLC9B1Q4ZJI4 515 aa15.04■□□□□ -0
SF1-211ENST00000448404 RAP1GAP2Q684P5 730 aa15.04■□□□□ -0
SF1-211ENST00000448404 GLB1LQ6UWU2 654 aa15.04■□□□□ -0
SF1-211ENST00000448404 TAS1R1Q7RTX1 841 aa15.04■□□□□ -0
SF1-211ENST00000448404 HIPK4Q8NE63 616 aa15.04■□□□□ -0
SF1-211ENST00000448404 PIWIL2Q8TC59 973 aaKnown RBP15.04■□□□□ -0
SF1-211ENST00000448404 HMCESQ96FZ2 354 aa15.04■□□□□ -0
SF1-211ENST00000448404 SEPT5Q99719 369 aaPredicted RBP15.04■□□□□ -0
SF1-211ENST00000448404 TASP1Q9H6P5 420 aa15.04■□□□□ -0
SF1-211ENST00000448404 EBF2Q9HAK2 575 aa15.04■□□□□ -0
SF1-211ENST00000448404 RNPEPL1Q9HAU8 725 aa15.04■□□□□ -0
SF1-211ENST00000448404 KCNK4Q9NYG8 393 aa15.04■□□□□ -0
SF1-211ENST00000448404 G3V2L1 256 aa15.03■□□□□ -0
SF1-211ENST00000448404 PDE5AO76074 875 aa15.03■□□□□ -0
SF1-211ENST00000448404 CCND1P24385 295 aa15.03■□□□□ -0
SF1-211ENST00000448404 PGM1P36871 562 aa15.03■□□□□ -0
SF1-211ENST00000448404 DSC2Q02487 901 aa15.03■□□□□ -0
SF1-211ENST00000448404 RCN1Q15293 331 aa15.03■□□□□ -0
SF1-211ENST00000448404 SNX31Q8N9S9 440 aa15.03■□□□□ -0
SF1-211ENST00000448404 CD99L2Q8TCZ2 262 aa15.03■□□□□ -0
SF1-211ENST00000448404 ZNF398Q8TD17 642 aa15.03■□□□□ -0
SF1-211ENST00000448404 IGSF8Q969P0 613 aa15.03■□□□□ -0
SF1-211ENST00000448404 CCDC124Q96CT7 223 aaKnown RBP15.03■□□□□ -0
SF1-211ENST00000448404 SCYL1Q96KG9 808 aa15.03■□□□□ -0
SF1-211ENST00000448404 UPF3AQ9H1J1 476 aaKnown RBP15.03■□□□□ -0
SF1-211ENST00000448404 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.03■□□□□ -08e-7■■□□□ 12.2
SF1-211ENST00000448404 NOP53Q9NZM5 478 aaKnown RBP15.03■□□□□ -0
SF1-211ENST00000448404 SF3B1O75533 1304 aaKnown RBP eCLIP15.03■□□□□ -08e-7■■■■□ 24.9
SF1-211ENST00000448404 TRPA1O75762 1119 aa15.03■□□□□ -0
SF1-211ENST00000448404 USP1O94782 785 aa15.03■□□□□ -0
SF1-211ENST00000448404 CYP11A1P05108 521 aa15.03■□□□□ -0
SF1-211ENST00000448404 SBK3P0C264 359 aa15.03■□□□□ -0
SF1-211ENST00000448404 PLK1P53350 603 aa15.03■□□□□ -0
SF1-211ENST00000448404 DLG1Q12959 904 aa15.03■□□□□ -0
SF1-211ENST00000448404 VARS2Q5ST30 1063 aaKnown RBP15.03■□□□□ -0
SF1-211ENST00000448404 RBM20Q5T481 1227 aaKnown RBP15.03■□□□□ -0
SF1-211ENST00000448404 CAPRIN2Q6IMN6 1127 aaKnown RBP15.03■□□□□ -0
SF1-211ENST00000448404 KYAT3Q6YP21 454 aaKnown RBP15.03■□□□□ -0
SF1-211ENST00000448404 PSMG2Q969U7 264 aa15.03■□□□□ -0
SF1-211ENST00000448404 OR52B2Q96RD2 323 aa15.03■□□□□ -0
SF1-211ENST00000448404 TBL1YQ9BQ87 522 aa15.03■□□□□ -0
SF1-211ENST00000448404 SUDS3Q9H7L9 328 aaPredicted RBP15.03■□□□□ -0
SF1-211ENST00000448404 SAR1AQ9NR31 198 aa15.03■□□□□ -0
SF1-211ENST00000448404 IPO11Q9UI26 975 aaKnown RBP15.03■□□□□ -0
SF1-211ENST00000448404 TADA2AO75478 443 aa15.02■□□□□ -0
SF1-211ENST00000448404 SPRP35270 261 aaPredicted RBP15.02■□□□□ -0
SF1-211ENST00000448404 IDH3AP50213 366 aa15.02■□□□□ -0
SF1-211ENST00000448404 CDH17Q12864 832 aa15.02■□□□□ -0
SF1-211ENST00000448404 RASIP1Q5U651 963 aa15.02■□□□□ -0
SF1-211ENST00000448404 TMEM198Q66K66 360 aa15.02■□□□□ -0
SF1-211ENST00000448404 SMYD5Q6GMV2 418 aa15.02■□□□□ -0
SF1-211ENST00000448404 CYP2S1Q96SQ9 504 aa15.02■□□□□ -0
SF1-211ENST00000448404 CCDC106Q9BWC9 280 aa15.02■□□□□ -0
SF1-211ENST00000448404 GATA5Q9BWX5 397 aaPredicted RBP15.02■□□□□ -0
SF1-211ENST00000448404 FSD1LQ9BXM9 530 aa15.02■□□□□ -0
SF1-211ENST00000448404 GLOD4Q9HC38 313 aa15.02■□□□□ -0
SF1-211ENST00000448404 ABCC13Q9NSE7 274 aa15.02■□□□□ -0
SF1-211ENST00000448404 ARHGEF38Q9NXL2 777 aa15.02■□□□□ -0
SF1-211ENST00000448404 DCXO43602 365 aa15.02□□□□□ -0.01
SF1-211ENST00000448404 ATP5HO75947 161 aa15.02□□□□□ -0.01
SF1-211ENST00000448404 TOMM70O94826 608 aa15.02□□□□□ -0.01
SF1-211ENST00000448404 SLC4A1P02730 911 aa15.02□□□□□ -0.01
SF1-211ENST00000448404 MSX2P35548 267 aaPredicted RBP15.02□□□□□ -0.01
SF1-211ENST00000448404 CD86P42081 329 aa15.02□□□□□ -0.01
SF1-211ENST00000448404 SLC1A2P43004 574 aa15.02□□□□□ -0.01
SF1-211ENST00000448404 HCAR3P49019 387 aa15.02□□□□□ -0.01
SF1-211ENST00000448404 EIF4EBP2Q13542 120 aaPredicted RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms