RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 RAB6CQ53S08 254 aa28.91■■■□□ 2.22
CBX4-202ENST00000448310 TCP11X2Q5H9J9 407 aa28.91■■■□□ 2.22
CBX4-202ENST00000448310 DPY19L3Q6ZPD9 716 aa28.91■■■□□ 2.22
CBX4-202ENST00000448310 BNIPLQ7Z465 357 aa28.91■■■□□ 2.22
CBX4-202ENST00000448310 TMEM145Q8NBT3 493 aa28.91■■■□□ 2.22
CBX4-202ENST00000448310 SLC20A1Q8WUM9 679 aa28.91■■■□□ 2.22
CBX4-202ENST00000448310 STK33Q9BYT3 514 aa28.91■■■□□ 2.22
CBX4-202ENST00000448310 RAB6CQ9H0N0 254 aa28.91■■■□□ 2.22
CBX4-202ENST00000448310 CAAP1Q9H8G2 361 aa28.91■■■□□ 2.22
CBX4-202ENST00000448310 DYRK4Q9NR20 520 aa28.91■■■□□ 2.22
CBX4-202ENST00000448310 METTL5Q9NRN9 209 aaKnown RBP28.91■■■□□ 2.22
CBX4-202ENST00000448310 PRNPP04156 253 aa28.9■■■□□ 2.22
CBX4-202ENST00000448310 C1SP09871 688 aa28.9■■■□□ 2.22
CBX4-202ENST00000448310 THEGLP0DJG4 465 aa28.9■■■□□ 2.22
CBX4-202ENST00000448310 ATP11AP98196 1134 aa28.9■■■□□ 2.22
CBX4-202ENST00000448310 ZNF284Q2VY69 593 aa28.9■■■□□ 2.22
CBX4-202ENST00000448310 HES3Q5TGS1 186 aa28.9■■■□□ 2.22
CBX4-202ENST00000448310 PHLDB2Q86SQ0 1253 aa28.9■■■□□ 2.22
CBX4-202ENST00000448310 HORMAD1Q86X24 394 aa28.9■■■□□ 2.22
CBX4-202ENST00000448310 MSANTD4Q8NCY6 345 aa28.9■■■□□ 2.22
CBX4-202ENST00000448310 HAPLN3Q96S86 360 aa28.9■■■□□ 2.22
CBX4-202ENST00000448310 IL36AQ9UHA7 158 aa28.9■■■□□ 2.22
CBX4-202ENST00000448310 ILVBLA1L0T0 632 aa28.89■■■□□ 2.22
CBX4-202ENST00000448310 ZNF821O75541 412 aaPredicted RBP28.89■■■□□ 2.22
CBX4-202ENST00000448310 LEFTY1O75610 366 aa28.89■■■□□ 2.22
CBX4-202ENST00000448310 HNF1BP35680 557 aa28.89■■■□□ 2.22
CBX4-202ENST00000448310 RECQLP46063 649 aaPredicted RBP28.89■■■□□ 2.22
CBX4-202ENST00000448310 KLK7P49862 253 aa28.89■■■□□ 2.22
CBX4-202ENST00000448310 ERN2Q76MJ5 926 aaKnown RBP28.89■■■□□ 2.22
CBX4-202ENST00000448310 DRC7Q8IY82 874 aa28.89■■■□□ 2.22
CBX4-202ENST00000448310 ZYG11BQ9C0D3 744 aa28.89■■■□□ 2.22
CBX4-202ENST00000448310 ATP13A1Q9HD20 1204 aa28.89■■■□□ 2.22
CBX4-202ENST00000448310 ZFR2Q9UPR6 939 aaKnown RBP28.89■■■□□ 2.22
CBX4-202ENST00000448310 ACTL7AQ9Y615 435 aa28.89■■■□□ 2.22
CBX4-202ENST00000448310 IGSF10Q6WRI0 2623 aa28.89■■■□□ 2.21
CBX4-202ENST00000448310 CHD5Q8TDI0 1954 aa28.88■■■□□ 2.21
CBX4-202ENST00000448310 ZMPSTE24O75844 475 aa28.88■■■□□ 2.21
CBX4-202ENST00000448310 GFPT2O94808 682 aa28.88■■■□□ 2.21
CBX4-202ENST00000448310 PCDH8O95206 1070 aa28.88■■■□□ 2.21
CBX4-202ENST00000448310 CLDN2P57739 230 aa28.88■■■□□ 2.21
CBX4-202ENST00000448310 SEL1L3Q68CR1 1132 aa28.88■■■□□ 2.21
CBX4-202ENST00000448310 NEK5Q6P3R8 708 aa28.88■■■□□ 2.21
CBX4-202ENST00000448310 FBXL19Q6PCT2 694 aa28.88■■■□□ 2.21
CBX4-202ENST00000448310 GANQ9H2C0 597 aa28.88■■■□□ 2.21
CBX4-202ENST00000448310 WASF2Q9Y6W5 498 aa28.88■■■□□ 2.21
CBX4-202ENST00000448310 TRIM38O00635 465 aa28.87■■■□□ 2.21
CBX4-202ENST00000448310 CDK4P11802 303 aa28.87■■■□□ 2.21
CBX4-202ENST00000448310 CKMT2P17540 419 aa28.87■■■□□ 2.21
CBX4-202ENST00000448310 EEF1GP26641 437 aaKnown RBP28.87■■■□□ 2.21
CBX4-202ENST00000448310 SERPINH1P50454 418 aaKnown RBP28.87■■■□□ 2.21
CBX4-202ENST00000448310 DNA2P51530 1060 aa28.87■■■□□ 2.21
CBX4-202ENST00000448310 ARF5P84085 180 aa28.87■■■□□ 2.21
CBX4-202ENST00000448310 GNA12Q03113 381 aa28.87■■■□□ 2.21
CBX4-202ENST00000448310 CCDC15Q0P6D6 951 aa28.87■■■□□ 2.21
CBX4-202ENST00000448310 TARDBPQ13148 414 aaKnown RBP eCLIP28.87■■■□□ 2.21
CBX4-202ENST00000448310 CDO1Q16878 200 aa28.87■■■□□ 2.21
CBX4-202ENST00000448310 ACBD5Q5T8D3 534 aaPredicted RBP28.87■■■□□ 2.21
CBX4-202ENST00000448310 RETSATQ6NUM9 610 aa28.87■■■□□ 2.21
CBX4-202ENST00000448310 SLC25A45Q8N413 288 aa28.87■■■□□ 2.21
CBX4-202ENST00000448310 OR13H1Q8NG92 308 aa28.87■■■□□ 2.21
CBX4-202ENST00000448310 LRIG1Q96JA1 1093 aa28.87■■■□□ 2.21
CBX4-202ENST00000448310 CALN1Q9BXU9 219 aa28.87■■■□□ 2.21
CBX4-202ENST00000448310 HDAC8Q9BY41 377 aa28.87■■■□□ 2.21
CBX4-202ENST00000448310 VPS16Q9H269 839 aa28.87■■■□□ 2.21
CBX4-202ENST00000448310 SCUBE2Q9NQ36 999 aa28.87■■■□□ 2.21
CBX4-202ENST00000448310 TMEM51Q9NW97 253 aa28.87■■■□□ 2.21
CBX4-202ENST00000448310 NOCTQ9UK39 431 aaKnown RBP28.87■■■□□ 2.21
CBX4-202ENST00000448310 FCF1Q9Y324 198 aaKnown RBP28.87■■■□□ 2.21
CBX4-202ENST00000448310 SIGLEC6O43699 453 aa28.86■■■□□ 2.21
CBX4-202ENST00000448310 HNRNPA2B1P22626 353 aaKnown RBP28.86■■■□□ 2.21
CBX4-202ENST00000448310 AKT2P31751 481 aa28.86■■■□□ 2.21
CBX4-202ENST00000448310 C15orf59Q2T9L4 293 aaPredicted RBP28.86■■■□□ 2.21
CBX4-202ENST00000448310 PROX2Q3B8N5 592 aa28.86■■■□□ 2.21
CBX4-202ENST00000448310 ZNF783Q6ZMS7 281 aa28.86■■■□□ 2.21
CBX4-202ENST00000448310 NXPE2Q96DL1 559 aa28.86■■■□□ 2.21
CBX4-202ENST00000448310 DCBLD2Q96PD2 775 aa28.86■■■□□ 2.21
CBX4-202ENST00000448310 UCKL1Q9NWZ5 548 aa28.86■■■□□ 2.21
CBX4-202ENST00000448310 GJB6O95452 261 aa28.85■■■□□ 2.21
CBX4-202ENST00000448310 CHRNB2P17787 502 aa28.85■■■□□ 2.21
CBX4-202ENST00000448310 GCNT7Q6ZNI0 430 aa28.85■■■□□ 2.21
CBX4-202ENST00000448310 ARCQ7LC44 396 aa28.85■■■□□ 2.21
CBX4-202ENST00000448310 RXFP2Q8WXD0 754 aa28.85■■■□□ 2.21
CBX4-202ENST00000448310 CRELD1Q96HD1 420 aa28.85■■■□□ 2.21
CBX4-202ENST00000448310 PPP1R16AQ96I34 528 aa28.85■■■□□ 2.21
CBX4-202ENST00000448310 C11orf70Q9BRQ4 267 aa28.85■■■□□ 2.21
CBX4-202ENST00000448310 NDFIP2Q9NV92 336 aa28.85■■■□□ 2.21
CBX4-202ENST00000448310 FASNP49327 2511 aaKnown RBP28.84■■■□□ 2.21
CBX4-202ENST00000448310 DGKAP23743 735 aa28.84■■■□□ 2.21
CBX4-202ENST00000448310 ACVRL1P37023 503 aa28.84■■■□□ 2.21
CBX4-202ENST00000448310 CCNHP51946 323 aaPredicted RBP28.84■■■□□ 2.21
CBX4-202ENST00000448310 NEK3P51956 506 aa28.84■■■□□ 2.21
CBX4-202ENST00000448310 FMO1Q01740 532 aa28.84■■■□□ 2.21
CBX4-202ENST00000448310 CARD16Q5EG05 197 aa28.84■■■□□ 2.21
CBX4-202ENST00000448310 PCDH20Q8N6Y1 951 aaKnown RBP28.84■■■□□ 2.21
CBX4-202ENST00000448310 JOSD2Q8TAC2 188 aa28.84■■■□□ 2.21
CBX4-202ENST00000448310 SLC30A5Q8TAD4 765 aa28.84■■■□□ 2.21
CBX4-202ENST00000448310 HEPHQ9BQS7 1158 aa28.84■■■□□ 2.21
CBX4-202ENST00000448310 MAGEB5Q9BZ81 275 aa28.84■■■□□ 2.21
CBX4-202ENST00000448310 CEP44Q9C0F1 390 aa28.84■■■□□ 2.21
CBX4-202ENST00000448310 NLRC4Q9NPP4 1024 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms