RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 EBF1Q9UH73 591 aa11.82□□□□□ -0.52
LINC00408-201ENST00000447784 MMP17Q9ULZ9 603 aa11.82□□□□□ -0.52
LINC00408-201ENST00000447784 SMG5Q9UPR3 1016 aaKnown RBP11.82□□□□□ -0.52
LINC00408-201ENST00000447784 SAR1BQ9Y6B6 198 aa11.82□□□□□ -0.52
LINC00408-201ENST00000447784 PIEZO1Q92508 2521 aa11.82□□□□□ -0.52
LINC00408-201ENST00000447784 CXorf51AA0A1B0GTR3 108 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 H7C0C1 242 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 MCF2LO15068 1137 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 HRO43593 1189 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 PRAMEF11O60813 436 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 ZNF189O75820 626 aaPredicted RBP11.81□□□□□ -0.52
LINC00408-201ENST00000447784 MAP3K6O95382 1288 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 KLF8O95600 359 aaPredicted RBP11.81□□□□□ -0.52
LINC00408-201ENST00000447784 APBB3O95704 486 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 HNRNPLP14866 589 aaKnown RBP eCLIP11.81□□□□□ -0.52
LINC00408-201ENST00000447784 PRLRP16471 622 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 NTSR1P30989 418 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 GARSP41250 739 aaKnown RBP11.81□□□□□ -0.52
LINC00408-201ENST00000447784 PAFAH1B1P43034 410 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 CTSOP43234 321 aaPredicted RBP11.81□□□□□ -0.52
LINC00408-201ENST00000447784 RECQLP46063 649 aaPredicted RBP11.81□□□□□ -0.52
LINC00408-201ENST00000447784 ATP5OP48047 213 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 AP1B1Q10567 949 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 ZNF234Q14588 700 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 RFTN1Q14699 578 aaPredicted RBP11.81□□□□□ -0.52
LINC00408-201ENST00000447784 STARD3Q14849 445 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 TMCO4Q5TGY1 634 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 PAPD7Q5XG87 772 aaKnown RBP11.81□□□□□ -0.52
LINC00408-201ENST00000447784 EGFLAMQ63HQ2 1017 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 NPNTQ6UXI9 565 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 LEKR1Q6ZMV7 388 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 NYAP1Q6ZVC0 841 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 ADAT2Q7Z6V5 191 aaKnown RBP11.81□□□□□ -0.52
LINC00408-201ENST00000447784 SFTPA1Q8IWL2 248 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 ALLCQ8N6M5 410 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 TFB1MQ8WVM0 346 aaKnown RBP11.81□□□□□ -0.52
LINC00408-201ENST00000447784 RPL10LQ96L21 214 aaKnown RBP11.81□□□□□ -0.52
LINC00408-201ENST00000447784 CCDC114Q96M63 670 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 ZNF599Q96NL3 588 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 FRMD8P1Q9BZ68 369 aaPredicted RBP11.81□□□□□ -0.52
LINC00408-201ENST00000447784 THAP10Q9P2Z0 257 aaPredicted RBP11.81□□□□□ -0.52
LINC00408-201ENST00000447784 SAE1Q9UBE0 346 aaPredicted RBP11.81□□□□□ -0.52
LINC00408-201ENST00000447784 SUN2Q9UH99 717 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 RAB23Q9ULC3 237 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 STON1Q9Y6Q2 735 aa11.81□□□□□ -0.52
LINC00408-201ENST00000447784 ZNF638Q14966 1978 aaKnown RBP11.81□□□□□ -0.52
LINC00408-201ENST00000447784 GOLGA6L10A0A0M3HER8 536 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 HACD1B0YJ81 288 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 J3KR12 359 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 PGRMC1O00264 195 aaKnown RBP11.8□□□□□ -0.52
LINC00408-201ENST00000447784 CES2O00748 559 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 MTSS1O43312 755 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 ZMPSTE24O75844 475 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 STK10O94804 968 aaKnown RBP11.8□□□□□ -0.52
LINC00408-201ENST00000447784 EPHX1P07099 455 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 PECAM1P16284 738 aaPredicted RBP11.8□□□□□ -0.52
LINC00408-201ENST00000447784 GLDCP23378 1020 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 CCNCP24863 283 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 WASP42768 502 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 STK19P49842 368 aaPredicted RBP11.8□□□□□ -0.52
LINC00408-201ENST00000447784 SERPINH1P50454 418 aaKnown RBP11.8□□□□□ -0.52
LINC00408-201ENST00000447784 RENBPP51606 427 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 DGKEP52429 567 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 EIF3EP60228 445 aaKnown RBP11.8□□□□□ -0.52
LINC00408-201ENST00000447784 ARF5P84085 180 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 OTUD4Q01804 1114 aaKnown RBP11.8□□□□□ -0.52
LINC00408-201ENST00000447784 ZNF33AQ06730 810 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 ADCY2Q08462 1091 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 SLC10A2Q12908 348 aaPredicted RBP11.8□□□□□ -0.52
LINC00408-201ENST00000447784 XRCC4Q13426 336 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 SIM2Q14190 667 aaPredicted RBP11.8□□□□□ -0.52
LINC00408-201ENST00000447784 CRY1Q16526 586 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 PTPRNQ16849 979 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 INO80DQ53TQ3 878 aaPredicted RBP11.8□□□□□ -0.52
LINC00408-201ENST00000447784 MARC1Q5VT66 337 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 HEATR6Q6AI08 1181 aaKnown RBP11.8□□□□□ -0.52
LINC00408-201ENST00000447784 DARS2Q6PI48 645 aaKnown RBP11.8□□□□□ -0.52
LINC00408-201ENST00000447784 ZC3H18Q86VM9 953 aaKnown RBP11.8□□□□□ -0.52
LINC00408-201ENST00000447784 CDKL3Q8IVW4 592 aaPredicted RBP11.8□□□□□ -0.52
LINC00408-201ENST00000447784 CCDC13Q8IYE1 715 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 RYBPQ8N488 228 aaPredicted RBP11.8□□□□□ -0.52
LINC00408-201ENST00000447784 IL17RCQ8NAC3 791 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 ACTL9Q8TC94 416 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 HDAC11Q96DB2 347 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 TSGA13Q96PP4 275 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 CINPQ9BW66 212 aaPredicted RBP11.8□□□□□ -0.52
LINC00408-201ENST00000447784 HOMER3Q9NSC5 361 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 CACNA2D2Q9NY47 1150 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 SEPT3Q9UH03 358 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 SLCO3A1Q9UIG8 710 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 HS3ST2Q9Y278 367 aa11.8□□□□□ -0.52
LINC00408-201ENST00000447784 HELZP42694 1942 aaKnown RBP11.8□□□□□ -0.52
LINC00408-201ENST00000447784 K7ERQ8 282 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 AXIN1O15169 862 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 MATN3O15232 486 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 BNIP3LO60238 219 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 MAFKO60675 156 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 MT-CO1P00395 513 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 SRCP12931 536 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 VASPP50552 380 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms