RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 CCR10P46092 362 aa19.39■□□□□ 0.69
SDCBP-204ENST00000447182 TAF6P49848 677 aa19.39■□□□□ 0.69
SDCBP-204ENST00000447182 NAGLUP54802 743 aa19.39■□□□□ 0.69
SDCBP-204ENST00000447182 TPI1P60174 286 aa19.39■□□□□ 0.69
SDCBP-204ENST00000447182 SLC12A1Q13621 1099 aa19.39■□□□□ 0.69
SDCBP-204ENST00000447182 CATSPER4Q7RTX7 472 aa19.39■□□□□ 0.69
SDCBP-204ENST00000447182 DRAXINQ8NBI3 349 aaPredicted RBP19.39■□□□□ 0.69
SDCBP-204ENST00000447182 RNF169Q8NCN4 708 aa19.39■□□□□ 0.69
SDCBP-204ENST00000447182 MOCOSQ96EN8 888 aa19.39■□□□□ 0.69
SDCBP-204ENST00000447182 KIFC1Q9BW19 673 aa19.39■□□□□ 0.69
SDCBP-204ENST00000447182 NXF3Q9H4D5 531 aaKnown RBP19.39■□□□□ 0.69
SDCBP-204ENST00000447182 COPS7BQ9H9Q2 264 aaPredicted RBP19.39■□□□□ 0.69
SDCBP-204ENST00000447182 WDR6Q9NNW5 1121 aaKnown RBP19.39■□□□□ 0.69
SDCBP-204ENST00000447182 ATXN10Q9UBB4 475 aa19.39■□□□□ 0.69
SDCBP-204ENST00000447182 STRNO43815 780 aa19.38■□□□□ 0.69
SDCBP-204ENST00000447182 SLC35E2BP0CK96 405 aa19.38■□□□□ 0.69
SDCBP-204ENST00000447182 SRGAP2BP0DMP2 458 aa19.38■□□□□ 0.69
SDCBP-204ENST00000447182 WARSP23381 471 aaKnown RBP19.38■□□□□ 0.69
SDCBP-204ENST00000447182 NMBRP28336 390 aa19.38■□□□□ 0.69
SDCBP-204ENST00000447182 POLD2P49005 469 aa19.38■□□□□ 0.69
SDCBP-204ENST00000447182 NDUFV1P49821 464 aa19.38■□□□□ 0.69
SDCBP-204ENST00000447182 GALNT2Q10471 571 aa19.38■□□□□ 0.69
SDCBP-204ENST00000447182 ZBTB17Q13105 803 aa19.38■□□□□ 0.69
SDCBP-204ENST00000447182 PABPC1LQ4VXU2 614 aaKnown RBP19.38■□□□□ 0.69
SDCBP-204ENST00000447182 ERO1BQ86YB8 467 aa19.38■□□□□ 0.69
SDCBP-204ENST00000447182 ALDH16A1Q8IZ83 802 aa19.38■□□□□ 0.69
SDCBP-204ENST00000447182 NPWQ8N729 165 aa19.38■□□□□ 0.69
SDCBP-204ENST00000447182 EZH1Q92800 747 aaPredicted RBP19.38■□□□□ 0.69
SDCBP-204ENST00000447182 NMD3Q96D46 503 aaKnown RBP19.38■□□□□ 0.69
SDCBP-204ENST00000447182 HIC2Q96JB3 615 aa19.38■□□□□ 0.69
SDCBP-204ENST00000447182 PPP1R36Q96LQ0 422 aa19.38■□□□□ 0.69
SDCBP-204ENST00000447182 CATSPER2Q96P56 530 aa19.38■□□□□ 0.69
SDCBP-204ENST00000447182 RBM38Q9H0Z9 239 aaKnown RBP19.38■□□□□ 0.69
SDCBP-204ENST00000447182 ELP3Q9H9T3 547 aa19.38■□□□□ 0.69
SDCBP-204ENST00000447182 LRRC4Q9HBW1 653 aa19.38■□□□□ 0.69
SDCBP-204ENST00000447182 VTA1Q9NP79 307 aa19.38■□□□□ 0.69
SDCBP-204ENST00000447182 SMIM28A0A1B0GU29 152 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 BEST1O76090 585 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 HSPA1AP0DMV8 641 aaKnown RBP19.37■□□□□ 0.69
SDCBP-204ENST00000447182 HSPA1BP0DMV9 641 aaKnown RBP19.37■□□□□ 0.69
SDCBP-204ENST00000447182 ENO3P13929 434 aaPredicted RBP19.37■□□□□ 0.69
SDCBP-204ENST00000447182 NFKB1P19838 968 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 PKNOX1P55347 436 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 MYBPC1Q00872 1141 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 CDH17Q12864 832 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 ART3Q13508 389 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 USP10Q14694 798 aaKnown RBP19.37■□□□□ 0.69
SDCBP-204ENST00000447182 PCBP1Q15365 356 aaKnown RBP eCLIP19.37■□□□□ 0.69
SDCBP-204ENST00000447182 SV2CQ496J9 727 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.37■□□□□ 0.69
SDCBP-204ENST00000447182 TMEM198Q66K66 360 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 KLHDC8BQ8IXV7 354 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 CENPLQ8N0S6 344 aaPredicted RBP19.37■□□□□ 0.69
SDCBP-204ENST00000447182 SIX6OS1Q8N1H7 587 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 FSTL5Q8N475 847 aaPredicted RBP19.37■□□□□ 0.69
SDCBP-204ENST00000447182 SHCBP1Q8NEM2 672 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 MAELQ96JY0 434 aaKnown RBP19.37■□□□□ 0.69
SDCBP-204ENST00000447182 TEKT5Q96M29 485 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 TSPAN18Q96SJ8 248 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 GNEQ9Y223 722 aaKnown RBP19.37■□□□□ 0.69
SDCBP-204ENST00000447182 RUVBL2Q9Y230 463 aaKnown RBP19.37■□□□□ 0.69
SDCBP-204ENST00000447182 TCAF2A6NFQ2 919 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 C9IYK1 514 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 BTBD19C9JJ37 291 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 CFLARO15519 480 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 HUS1O60921 280 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 ASLP04424 464 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 FYNP06241 537 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 SPATA31D3P0C874 917 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 GJA9P57773 515 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 APOFQ13790 326 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 NADK2Q4G0N4 442 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 NAPEPLDQ6IQ20 393 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 DLK2Q6UY11 383 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 B3GNT6Q6ZMB0 384 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 RBM44Q6ZP01 1051 aaKnown RBP19.37■□□□□ 0.69
SDCBP-204ENST00000447182 SPATA31D4Q6ZUB0 917 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 HFE2Q6ZVN8 426 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 PAQR9Q6ZVX9 377 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 METTL25Q8N6Q8 603 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 TMEM102Q8N9M5 508 aaPredicted RBP19.37■□□□□ 0.69
SDCBP-204ENST00000447182 B4GALNT2Q8NHY0 566 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 DPF3Q92784 378 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 PKP2Q99959 881 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 ANLNQ9NQW6 1124 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 FBXW11Q9UKB1 542 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 TMCO1Q9UM00 188 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 PADI4Q9UM07 663 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 G3BP2Q9UN86 482 aaKnown RBP19.37■□□□□ 0.69
SDCBP-204ENST00000447182 KCNH4Q9UQ05 1017 aa19.37■□□□□ 0.69
SDCBP-204ENST00000447182 FNDC1Q4ZHG4 1894 aaPredicted RBP19.36■□□□□ 0.69
SDCBP-204ENST00000447182 I6L893 689 aaPredicted RBP19.36■□□□□ 0.69
SDCBP-204ENST00000447182 PHGDHO43175 533 aaKnown RBP19.36■□□□□ 0.69
SDCBP-204ENST00000447182 XPOTO43592 962 aaKnown RBP19.36■□□□□ 0.69
SDCBP-204ENST00000447182 DLX3O60479 287 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 GPR32O75388 356 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 PSMD8P48556 350 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 CDC42EP1Q00587 391 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 TTLL12Q14166 644 aaPredicted RBP19.36■□□□□ 0.69
SDCBP-204ENST00000447182 XKR4Q5GH76 650 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms