RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 RBBP8Q99708 897 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 PITPNM3Q9BZ71 974 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 MAGEH1Q9H213 219 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 PIH1D1Q9NWS0 290 aaKnown RBP13.39□□□□□ -0.27
CPSF4-206ENST00000441580 PRKAG3Q9UGI9 489 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 TCAF1Q9Y4C2 921 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 PCDHB12Q9Y5F1 795 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 INSL5Q9Y5Q6 135 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 OBSL1O75147 1896 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 A0A1B0GVM2 712 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 TCAF2A6NFQ2 919 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 KLF11O14901 512 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 UGT1A9O60656 530 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 PRAMEF11O60813 436 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 CLDN11O75508 207 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 PEX11BO96011 259 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 GSTA1P08263 222 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 TROVE2P10155 538 aaKnown RBP eCLIP13.38□□□□□ -0.27
CPSF4-206ENST00000441580 OR1E1P30953 314 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 MAGEA12P43365 314 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 SERPINB4P48594 390 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 ILF2Q12905 390 aaKnown RBP13.38□□□□□ -0.27
CPSF4-206ENST00000441580 ZNF235Q14590 738 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 FAM133BQ5BKY9 247 aaKnown RBP13.38□□□□□ -0.27
CPSF4-206ENST00000441580 RNF187Q5TA31 235 aaPredicted RBP13.38□□□□□ -0.27
CPSF4-206ENST00000441580 RNF43Q68DV7 783 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 KIAA0930Q6ICG6 404 aaPredicted RBP13.38□□□□□ -0.27
CPSF4-206ENST00000441580 PKN3Q6P5Z2 889 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 KDELC1Q6UW63 502 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 SPATA22Q8NHS9 363 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 ZNF398Q8TD17 642 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 PSMG2Q969U7 264 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 PABPC5Q96DU9 382 aaKnown RBP13.38□□□□□ -0.27
CPSF4-206ENST00000441580 ZNF419Q96HQ0 510 aaPredicted RBP13.38□□□□□ -0.27
CPSF4-206ENST00000441580 RANBP9Q96S59 729 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 APOL2Q9BQE5 337 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 FAM167BQ9BTA0 163 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 POLR1EQ9GZS1 481 aaKnown RBP13.38□□□□□ -0.27
CPSF4-206ENST00000441580 ZBP1Q9H171 429 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 KDM4CQ9H3R0 1056 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 UGT1A7Q9HAW7 530 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 UGT1A10Q9HAW8 530 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 UGT1A8Q9HAW9 530 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 NT5MQ9NPB1 228 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 IL23AQ9NPF7 189 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 KLHL14Q9P2G3 628 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 SLC17A7Q9P2U7 560 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 GRID1Q9ULK0 1009 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 PHTF1Q9UMS5 762 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 PLLPQ9Y342 182 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 ASB3Q9Y575 518 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 MIA3Q5JRA6 1907 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 CHD5Q8TDI0 1954 aa13.38□□□□□ -0.27
CPSF4-206ENST00000441580 NUP205Q92621 2012 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 MYLKQ15746 1914 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 HEATR9A2RTY3 570 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 TYW5A2RUC4 315 aaKnown RBP13.37□□□□□ -0.27
CPSF4-206ENST00000441580 TRIM43BA6NCK2 446 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 MYO1CO00159 1063 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 TPP1O14773 563 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 BIRC5O15392 142 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 STC2O76061 302 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 MT-CYBP00156 380 aaPredicted RBP13.37□□□□□ -0.27
CPSF4-206ENST00000441580 ERVK-10P10266 1014 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 CORO1AP31146 461 aaKnown RBP13.37□□□□□ -0.27
CPSF4-206ENST00000441580 KCNQ1P51787 676 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 WNT3AP56704 352 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 TWF1Q12792 350 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 PPIGQ13427 754 aaKnown RBP eCLIP13.37□□□□□ -0.273e-6■□□□□ 10.9
CPSF4-206ENST00000441580 OLIG2Q13516 323 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 LAMB3Q13751 1172 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 RFTN1Q14699 578 aaPredicted RBP13.37□□□□□ -0.27
CPSF4-206ENST00000441580 LBRQ14739 615 aaKnown RBP13.37□□□□□ -0.27
CPSF4-206ENST00000441580 INSCQ1MX18 579 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 LACTB2Q53H82 288 aaPredicted RBP13.37□□□□□ -0.27
CPSF4-206ENST00000441580 CERCAMQ5T4B2 595 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 MROH9Q5TGP6 573 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 ALG1LQ6GMV1 187 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 FAM117BQ6P1L5 589 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 ZNF783Q6ZMS7 281 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 FAM47EQ6ZV65 393 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 SETD3Q86TU7 594 aaPredicted RBP13.37□□□□□ -0.27
CPSF4-206ENST00000441580 HERC6Q8IVU3 1022 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 CNTN4Q8IWV2 1026 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 NDUFAF2Q8N183 169 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 ZNF75CPQ92670 426 aaPredicted RBP13.37□□□□□ -0.27
CPSF4-206ENST00000441580 TRIM43Q96BQ3 446 aaPredicted RBP13.37□□□□□ -0.27
CPSF4-206ENST00000441580 MRGPRX2Q96LB1 330 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 FCRL3Q96P31 734 aaPredicted RBP13.37□□□□□ -0.27
CPSF4-206ENST00000441580 MANSC1Q9H8J5 431 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 PDFQ9HBH1 243 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 RXFP1Q9HBX9 757 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 ARNT2Q9HBZ2 717 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 ATP13A1Q9HD20 1204 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 C20orf96Q9NUD7 363 aaPredicted RBP13.37□□□□□ -0.27
CPSF4-206ENST00000441580 UBP1Q9NZI7 540 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 MID2Q9UJV3 735 aa13.37□□□□□ -0.27
CPSF4-206ENST00000441580 HMX2A2RU54 273 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 CCT8L1PA6NM43 557 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 PMPCBO75439 489 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 750 ms