RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 DECR2Q9NUI1 292 aa5.26□□□□□ -1.57
PFDN4-202ENST00000441080 ELOVL5Q9NYP7 299 aa5.26□□□□□ -1.57
PFDN4-202ENST00000441080 NLKQ9UBE8 527 aa5.26□□□□□ -1.57
PFDN4-202ENST00000441080 ANAPC4Q9UJX5 808 aa5.26□□□□□ -1.57
PFDN4-202ENST00000441080 PCDHA12Q9UN75 941 aa5.26□□□□□ -1.57
PFDN4-202ENST00000441080 ARHGAP26Q9UNA1 814 aa5.26□□□□□ -1.57
PFDN4-202ENST00000441080 CNPY2Q9Y2B0 182 aa5.26□□□□□ -1.57
PFDN4-202ENST00000441080 RAP2CQ9Y3L5 183 aa5.26□□□□□ -1.57
PFDN4-202ENST00000441080 MST1RQ04912 1400 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 RNMTO43148 476 aaKnown RBP5.25□□□□□ -1.57
PFDN4-202ENST00000441080 CEP104O60308 925 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 ATG13O75143 517 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 ADAP00813 363 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 SERPINC1P01008 464 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 CDK4P11802 303 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 UNGP13051 313 aaPredicted RBP5.25□□□□□ -1.57
PFDN4-202ENST00000441080 YWHAQP27348 245 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 RPP30P78346 268 aaKnown RBP5.25□□□□□ -1.57
PFDN4-202ENST00000441080 UBAP2Q5T6F2 1119 aaKnown RBP5.25□□□□□ -1.57
PFDN4-202ENST00000441080 TBC1D9BQ66K14 1250 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 TCP11L2Q8N4U5 519 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 ZNF548Q8NEK5 533 aaPredicted RBP5.25□□□□□ -1.57
PFDN4-202ENST00000441080 TNIP2Q8NFZ5 429 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 NOC3LQ8WTT2 800 aaKnown RBP5.25□□□□□ -1.57
PFDN4-202ENST00000441080 TMEM174Q8WUU8 243 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 ST8SIA4Q92187 359 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 ZBTB10Q96DT7 871 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 APOPT1Q96IL0 206 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 PPM1MQ96MI6 270 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 ZNF778Q96MU6 729 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 FUZQ9BT04 418 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 SLC32A1Q9H598 525 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 TASP1Q9H6P5 420 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 ATP8A2Q9NTI2 1148 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 PLEKHB1Q9UF11 243 aaPredicted RBP5.25□□□□□ -1.57
PFDN4-202ENST00000441080 CLDN16Q9Y5I7 305 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 SLC4A4Q9Y6R1 1079 aa5.25□□□□□ -1.57
PFDN4-202ENST00000441080 GOLGA6L10A0A0M3HER8 536 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 TMEM272A0A1B0GTI8 110 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 DDTLA6NHG4 134 aaPredicted RBP5.24□□□□□ -1.57
PFDN4-202ENST00000441080 SOCS2O14508 198 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 KIF1CO43896 1103 aaKnown RBP5.24□□□□□ -1.57
PFDN4-202ENST00000441080 MOSPD3O75425 235 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 NDUFB8O95169 186 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 TMEM191BP0C7N4 346 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 TNFSF8P32971 234 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 GGT5P36269 586 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 DPP6P42658 865 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 CDH15P55291 814 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 TBX2Q13207 712 aaPredicted RBP5.24□□□□□ -1.57
PFDN4-202ENST00000441080 PKP1Q13835 747 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 BAK1Q16611 211 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 ME3Q16798 604 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 MANEAQ5SRI9 462 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 SLC9C2Q5TAH2 1124 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 TRAPPC11Q7Z392 1133 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 GPSM1Q86YR5 675 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 FAM217AQ8IXS0 508 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 MMP21Q8N119 569 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 CPXM2Q8N436 756 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 RNF125Q96EQ8 232 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 RRP36Q96EU6 259 aaKnown RBP5.24□□□□□ -1.57
PFDN4-202ENST00000441080 C1QTNF7Q9BXJ2 289 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 B3GNT4Q9C0J1 378 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 TTYH1Q9H313 450 aaPredicted RBP5.24□□□□□ -1.57
PFDN4-202ENST00000441080 FOXP1Q9H334 677 aaPredicted RBP5.24□□□□□ -1.57
PFDN4-202ENST00000441080 MAP6D1Q9H9H5 199 aa5.24□□□□□ -1.57
PFDN4-202ENST00000441080 BEX4Q9NWD9 120 aaPredicted RBP5.24□□□□□ -1.57
PFDN4-202ENST00000441080 COL3A1P02461 1466 aaPredicted RBP5.24□□□□□ -1.57
PFDN4-202ENST00000441080 LY6G6EA0A0G2JKS1 128 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 C17orf113A0A1B0GUU1 675 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 C17orf102A2RUQ5 167 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 TEX22C9J3V5 150 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 TNPO2O14787 897 aaKnown RBP5.23□□□□□ -1.57
PFDN4-202ENST00000441080 TSPAN4O14817 238 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 MDM4O15151 490 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 TMPRSS3P57727 454 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 G3BP1Q13283 466 aaKnown RBP eCLIP5.23□□□□□ -1.57
PFDN4-202ENST00000441080 CAMK1Q14012 370 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 ZNF766Q5HY98 468 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 C11orf87Q6NUJ2 197 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 IL20RBQ6UXL0 311 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 SERPINA11Q86U17 422 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 TRIM74Q86UV6 250 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 TRIM73Q86UV7 250 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 NRACQ8N912 160 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 ZCCHC10Q8TBK6 192 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 TBC1D22AQ8WUA7 517 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 ATOH1Q92858 354 aaPredicted RBP5.23□□□□□ -1.57
PFDN4-202ENST00000441080 NLRP4Q96MN2 994 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 PAIP1Q9H074 479 aaKnown RBP5.23□□□□□ -1.57
PFDN4-202ENST00000441080 FZD3Q9NPG1 666 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 TBC1D14Q9P2M4 693 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 RNF7Q9UBF6 113 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 TMEM98Q9Y2Y6 226 aa5.23□□□□□ -1.57
PFDN4-202ENST00000441080 IGLV5-39A0A0G2JS06 123 aa5.22□□□□□ -1.57
PFDN4-202ENST00000441080 GAGE10A6NGK3 116 aa5.22□□□□□ -1.57
PFDN4-202ENST00000441080 EPN2O95208 641 aa5.22□□□□□ -1.57
PFDN4-202ENST00000441080 SYF2O95926 243 aaKnown RBP5.22□□□□□ -1.57
PFDN4-202ENST00000441080 IFNA2P01563 188 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms