RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 CTSKP43235 329 aa20.27■□□□□ 0.84
SHROOM1-204ENST00000440118 SLC20A2Q08357 652 aa20.27■□□□□ 0.84
SHROOM1-204ENST00000440118 NAPEPLDQ6IQ20 393 aa20.27■□□□□ 0.84
SHROOM1-204ENST00000440118 PCDH20Q8N6Y1 951 aaKnown RBP20.27■□□□□ 0.84
SHROOM1-204ENST00000440118 CENPIQ92674 756 aaPredicted RBP20.27■□□□□ 0.84
SHROOM1-204ENST00000440118 EPAS1Q99814 870 aa20.27■□□□□ 0.84
SHROOM1-204ENST00000440118 CNPY3Q9BT09 278 aa20.27■□□□□ 0.84
SHROOM1-204ENST00000440118 RETREG1Q9H6L5 497 aa20.27■□□□□ 0.84
SHROOM1-204ENST00000440118 PREBQ9HCU5 417 aa20.27■□□□□ 0.84
SHROOM1-204ENST00000440118 ZNF212Q9UDV6 495 aa20.27■□□□□ 0.84
SHROOM1-204ENST00000440118 PCOLCE2Q9UKZ9 415 aa20.27■□□□□ 0.84
SHROOM1-204ENST00000440118 APOBEC2Q9Y235 224 aaKnown RBP20.27■□□□□ 0.84
SHROOM1-204ENST00000440118 FCF1Q9Y324 198 aaKnown RBP20.27■□□□□ 0.84
SHROOM1-204ENST00000440118 FAM72CH0Y354 149 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 CREB3O43889 395 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 CTSLP07711 333 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 FTH1P19P0C7X4 201 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 EPHB2P29323 1055 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 ACVRL1P37023 503 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 GRK6P43250 576 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 RPL7AP62424 266 aaKnown RBP20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 ARF5P84085 180 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 POLD3Q15054 466 aaPredicted RBP20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 ARSIQ5FYB1 569 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 FAM72AQ5TYM5 149 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 MANEALQ5VSG8 457 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 FAM72DQ6L9T8 149 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 DPY19L3Q6ZPD9 716 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 FAM72BQ86X60 149 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 MCOLN2Q8IZK6 566 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 CHST14Q8NCH0 376 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 TMIEQ8NEW7 156 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 BAP1Q92560 729 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 CDC6Q99741 560 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 TM6SF2Q9BZW4 377 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 EBF2Q9HAK2 575 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 TMEM248Q9NWD8 314 aa20.26■□□□□ 0.83
SHROOM1-204ENST00000440118 A0A1B0GTH6 734 aa20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 A0A1W2PQC6 194 aa20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 GOLGA8CPA6NN73 597 aa20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 ATMINO43313 823 aaPredicted RBP20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 LATO43561 262 aa20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 RNGTTO60942 597 aaKnown RBP20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 PCDH8O95206 1070 aa20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 PSMA2P25787 234 aa20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 ARRB1P49407 418 aaPredicted RBP20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 KLHL30Q0D2K2 578 aa20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 SCAPQ12770 1279 aa20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 STAT4Q14765 748 aa20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 KLHL40Q2TBA0 621 aa20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 KCNT1Q5JUK3 1230 aa20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 UNQ6494/PRO21346Q6UXR6 183 aa20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 TMC6Q7Z403 805 aa20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 IRF2BP2Q7Z5L9 587 aa20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 TRIM69Q86WT6 500 aa20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 ARRDC3Q96B67 414 aa20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 MAGEH1Q9H213 219 aa20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 ZDHHC6Q9H6R6 413 aa20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 CATSPERBQ9H7T0 1116 aa20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 PARVAQ9NVD7 372 aa20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 DMTF1Q9Y222 760 aa20.25■□□□□ 0.83
SHROOM1-204ENST00000440118 TRPM6Q9BX84 2022 aa20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 KMT2BQ9UMN6 2715 aaPredicted RBP20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 GOLGA6L19H0YKK7 550 aa20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 MAGEC1O60732 1142 aa20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 LEFTY1O75610 366 aa20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 ZMPSTE24O75844 475 aa20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 L1CAMP32004 1257 aa20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 CCNHP51946 323 aaPredicted RBP20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 AIF1P55008 147 aa20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 CARD16Q5EG05 197 aa20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 PIP5KL1Q5T9C9 394 aa20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 ERN2Q76MJ5 926 aaKnown RBP20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 NLRP14Q86W24 1093 aa20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 ARHGEF2Q92974 986 aaKnown RBP20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 FAM131CQ96AQ9 280 aa20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 VCPIP1Q96JH7 1222 aa20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 ELF4Q99607 663 aaPredicted RBP20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 MYOCQ99972 504 aa20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 HEPHQ9BQS7 1158 aa20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 HAUS4Q9H6D7 363 aa20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 NDFIP2Q9NV92 336 aa20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 TAS2R14Q9NYV8 317 aa20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 NEUROG3Q9Y4Z2 214 aa20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 IGF2RP11717 2491 aa20.24■□□□□ 0.83
SHROOM1-204ENST00000440118 A0A1W2PQU0 124 aa20.23■□□□□ 0.83
SHROOM1-204ENST00000440118 PRAMEF26H0Y7S4 382 aa20.23■□□□□ 0.83
SHROOM1-204ENST00000440118 TLR4O00206 839 aa20.23■□□□□ 0.83
SHROOM1-204ENST00000440118 YKT6O15498 198 aa20.23■□□□□ 0.83
SHROOM1-204ENST00000440118 PCDHGA12O60330 932 aa20.23■□□□□ 0.83
SHROOM1-204ENST00000440118 WNT1P04628 370 aa20.23■□□□□ 0.83
SHROOM1-204ENST00000440118 PTMSP20962 102 aa20.23■□□□□ 0.83
SHROOM1-204ENST00000440118 NEK3P51956 506 aa20.23■□□□□ 0.83
SHROOM1-204ENST00000440118 CCDC157Q569K6 752 aa20.23■□□□□ 0.83
SHROOM1-204ENST00000440118 TDRD12Q587J7 1177 aaKnown RBP20.23■□□□□ 0.83
SHROOM1-204ENST00000440118 FBXL19Q6PCT2 694 aa20.23■□□□□ 0.83
SHROOM1-204ENST00000440118 LEKR1Q6ZMV7 388 aa20.23■□□□□ 0.83
SHROOM1-204ENST00000440118 PYROXD2Q8N2H3 581 aa20.23■□□□□ 0.83
SHROOM1-204ENST00000440118 CHCHD4Q8N4Q1 142 aa20.23■□□□□ 0.83
SHROOM1-204ENST00000440118 RTL3Q8N8U3 475 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms