RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 VCPIP1Q96JH7 1222 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 IGFLR1Q9H665 355 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 ERAP1Q9NZ08 941 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 DUSP12Q9UNI6 340 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 TSPAN4O14817 238 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 MYL4P12829 197 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 TAF6P49848 677 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 BRINP2Q9C0B6 783 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 GIT1Q9Y2X7 761 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 C3P01024 1663 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 TRPC5OSA6NMA1 111 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 ZNF879B4DU55 563 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 TGFB1I1O43294 461 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 NOS1APO75052 506 aaPredicted RBP11.74□□□□□ -0.53
CCBE1-202ENST00000439986 MYL6P60660 151 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 PPIL2Q13356 520 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 USP39Q53GS9 565 aaKnown RBP11.74□□□□□ -0.53
CCBE1-202ENST00000439986 TCHHL1Q5QJ38 904 aaPredicted RBP11.74□□□□□ -0.53
CCBE1-202ENST00000439986 SCARA3Q6AZY7 606 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 PTAR1Q7Z6K3 402 aaPredicted RBP11.74□□□□□ -0.53
CCBE1-202ENST00000439986 FAM71AQ8IYT1 594 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 USP13Q92995 863 aaPredicted RBP11.74□□□□□ -0.53
CCBE1-202ENST00000439986 HERC2P3Q9BVR0 1158 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 MND1Q9BWT6 205 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 TIMM13Q9Y5L4 95 aaPredicted RBP11.74□□□□□ -0.53
CCBE1-202ENST00000439986 FSCN2O14926 492 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 SOAT2O75908 522 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 TGDSO95455 350 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 PSMC3P17980 439 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 PCSK1P29120 753 aa11.74□□□□□ -0.53
CCBE1-202ENST00000439986 GJD4Q96KN9 370 aaPredicted RBP11.74□□□□□ -0.53
CCBE1-202ENST00000439986 NUSAP1Q9BXS6 441 aaKnown RBP11.74□□□□□ -0.53
CCBE1-202ENST00000439986 MGRN1O60291 552 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 ZNF24P17028 368 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 CLCN3P51790 818 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 ADARP55265 1226 aaKnown RBP11.73□□□□□ -0.53
CCBE1-202ENST00000439986 FMO1Q01740 532 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 TLR1Q15399 786 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 CACHD1Q5VU97 1274 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 ZDHHC15Q96MV8 337 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 CIPCQ9C0C6 399 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 EFCAB1Q9HAE3 211 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 SDR42E2A6NKP2 422 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 F8VP50 259 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 CYB561D2O14569 222 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 DSG3P32926 999 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 SLC11A2P49281 568 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 ATP12AP54707 1039 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 IFI44LQ53G44 452 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 KLHL12Q53G59 568 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 DDI2Q5TDH0 399 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 XRRA1Q6P2D8 792 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 ZCCHC23Q6ZST2 131 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 FITM2Q8N6M3 262 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 GATAD2BQ8WXI9 593 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 TLCD1Q96CP7 247 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 PFDN5Q99471 154 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 SLC6A15Q9H2J7 730 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 IKZF4Q9H2S9 585 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 PIAS1O75925 651 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 DEFA1P59665 94 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 DEFA3P59666 94 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 DOK6Q6PKX4 331 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 FCGR1BQ92637 280 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 DPF1Q92782 380 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 HERPUD2Q9BSE4 406 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 GPRC5DQ9NZD1 345 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 TRPC4Q9UBN4 977 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 FAM237BA0A1B0GVD1 139 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 CBX4O00257 560 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 MEIS2O14770 477 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 OGTO15294 1046 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 ZW10O43264 779 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 ABHD2P08910 425 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 TMEM11P17152 192 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 TNNI3P19429 210 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 CLK2P49760 499 aaKnown RBP11.73□□□□□ -0.53
CCBE1-202ENST00000439986 YWHAZP63104 245 aaKnown RBP11.73□□□□□ -0.53
CCBE1-202ENST00000439986 ABATP80404 500 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 MFSD5Q6N075 450 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 ZNF852Q6ZMS4 543 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 RBBP8Q99708 897 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 AIF1LQ9BQI0 150 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 AGO4Q9HCK5 861 aaKnown RBP11.73□□□□□ -0.53
CCBE1-202ENST00000439986 NT5MQ9NPB1 228 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 C14orf166Q9Y224 244 aaKnown RBP11.73□□□□□ -0.53
CCBE1-202ENST00000439986 ANKRD63C9JTQ0 380 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 VPS26AO75436 327 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 LTFP02788 710 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 SPATA31C1P0DKV0 1188 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 EIF2S3P41091 472 aaKnown RBP11.73□□□□□ -0.53
CCBE1-202ENST00000439986 BMT2Q1RMZ1 405 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 FAM83EQ2M2I3 478 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 ANKDD1AQ495B1 522 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 UGT3A1Q6NUS8 523 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 ZNF333Q96JL9 665 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 ACOX2Q99424 681 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 FANCEQ9HB96 536 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 NR2E1Q9Y466 385 aa11.73□□□□□ -0.53
CCBE1-202ENST00000439986 CPA3P15088 417 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms