RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 FOXD4Q12950 439 aaPredicted RBP4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 INPP5JQ15735 1006 aaPredicted RBP4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 ENTPD8Q5MY95 495 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 PRSS45Q7RTY3 260 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 MMP21Q8N119 569 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 CPXM2Q8N436 756 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 TCP11L2Q8N4U5 519 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 TEX19Q8NA77 164 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 TMEM174Q8WUU8 243 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 ST8SIA4Q92187 359 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 ZNF419Q96HQ0 510 aaPredicted RBP4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 APOPT1Q96IL0 206 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 PKNOX2Q96KN3 472 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 PHF7Q9BWX1 381 aaPredicted RBP4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 VEZTQ9HBM0 779 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 SEMA4BQ9NPR2 832 aaPredicted RBP4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 ATP8A2Q9NTI2 1148 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 POT1Q9NUX5 634 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 MSRB1Q9NZV6 116 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 BCCIPQ9P287 314 aaKnown RBP eCLIP4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 HEY2Q9UBP5 337 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 ZNF70Q9UC06 446 aaPredicted RBP4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 RAP2CQ9Y3L5 183 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 CYP46A1Q9Y6A2 500 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 SETD1BQ9UPS6 1966 aaKnown RBP4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 A0A096LPK6 155 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 ARHGAP10A1A4S6 786 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 C17orf100A8MU93 164 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 FAM157AC9JC47 383 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 SOCS2O14508 198 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 PER2O15055 1255 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 EPB41L2O43491 1005 aaKnown RBP4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 MOSPD3O75425 235 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 IFNA2P01563 188 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 MMP3P08254 477 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 ENO3P13929 434 aaPredicted RBP4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 PTGER1P34995 402 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 KRT9P35527 623 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 DPP6P42658 865 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 BLKP51451 505 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 YWHAZP63104 245 aaKnown RBP4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 G3BP1Q13283 466 aaKnown RBP eCLIP4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 LAMB3Q13751 1172 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 RABEP1Q15276 862 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 RPE65Q16518 533 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 EDRF1Q3B7T1 1238 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 ZNF766Q5HY98 468 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 HMBOX1Q6NT76 420 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 C11orf87Q6NUJ2 197 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 RRM2BQ7LG56 351 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 PIM3Q86V86 326 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 ARMC8Q8IUR7 673 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 C11orf65Q8NCR3 313 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 CMASQ8NFW8 434 aaPredicted RBP4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 BICD2Q8TD16 824 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 IGFBPL1Q8WX77 278 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 RUFY2Q8WXA3 655 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 EME1Q96AY2 570 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 RNF125Q96EQ8 232 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 HMCESQ96FZ2 354 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 SLC26A6Q9BXS9 759 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 UBA5Q9GZZ9 404 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 PAIP1Q9H074 479 aaKnown RBP4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 PDCL3Q9H2J4 239 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 EPHX3Q9H6B9 360 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 PREBQ9HCU5 417 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 IL1RAPL1Q9NZN1 696 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 SLC25A10Q9UBX3 287 aaPredicted RBP4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 CDH22Q9UJ99 828 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 PCDHA12Q9UN75 941 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 ARHGAP26Q9UNA1 814 aa4.05□□□□□ -1.76
LSM1P1-201ENST00000438629 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 TARSL2A2RTX5 802 aaKnown RBP4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 TNPO2O14787 897 aaKnown RBP4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 MDM4O15151 490 aa4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 SH3BP5O60239 455 aa4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 CEP104O60308 925 aa4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 ATG13O75143 517 aa4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 SYF2O95926 243 aaKnown RBP4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 CYP19A1P11511 503 aaPredicted RBP4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 UNGP13051 313 aaPredicted RBP4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 PRF1P14222 555 aa4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 RFC1P35251 1148 aaPredicted RBP4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 TUBP50607 506 aa4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 DDX10Q13206 875 aaKnown RBP4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 NAPEPLDQ6IQ20 393 aa4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 ACAD10Q6JQN1 1059 aa4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 SLC22A25Q6T423 547 aa4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 SERPINA11Q86U17 422 aa4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 FAM217AQ8IXS0 508 aa4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 TMEM170AQ8WVE7 144 aa4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 LPAR1Q92633 364 aa4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 VOPP1Q96AW1 172 aa4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 MPP4Q96JB8 637 aa4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 NLRP4Q96MN2 994 aa4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 EYA3Q99504 573 aa4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 CLSTN3Q9BQT9 956 aa4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 C1QTNF7Q9BXJ2 289 aa4.04□□□□□ -1.76
LSM1P1-201ENST00000438629 B3GNT4Q9C0J1 378 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms