RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 TRPM7Q96QT4 1865 aa16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 MYADML2A6NDP7 307 aa16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 TK2O00142 265 aa16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 SRGAP2BP0DMP2 458 aa16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 SP100P23497 879 aaPredicted RBP16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 BDNFP23560 247 aa16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 ADRA1AP35348 466 aa16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 ARCN1P48444 511 aaKnown RBP16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 CFAP157Q5JU67 520 aa16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 OR52E8Q6IFG1 317 aa16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 RNF111Q6ZNA4 994 aa16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 CENPLQ8N0S6 344 aaPredicted RBP16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 SPATA22Q8NHS9 363 aa16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 PTCD2Q8WV60 388 aaKnown RBP16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 IFT43Q96FT9 208 aa16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 OR52B2Q96RD2 323 aa16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 NR1H4Q96RI1 486 aaPredicted RBP16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 ECSITQ9BQ95 431 aa16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 ZNF385DQ9H6B1 395 aa16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 MRM3Q9HC36 420 aaKnown RBP16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 TCF7L2Q9NQB0 619 aa16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 MAN1C1Q9NR34 630 aa16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 CPSF2Q9P2I0 782 aaKnown RBP16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 TLK1Q9UKI8 766 aa16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 MAGED2Q9UNF1 606 aaPredicted RBP16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 NUP205Q92621 2012 aa16.33■□□□□ 0.2
HLA-DQB2-231ENST00000435145 SHROOM3Q8TF72 1996 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 E9PBE3 544 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 GOLGA8TH3BQL2 631 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 HDAC3O15379 428 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 KLHL41O60662 606 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 MAFKO60675 156 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 KPNA6O60684 536 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 ZNF623O75123 536 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 ANXA9O76027 345 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 AHSGP02765 367 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 CHRNGP07510 517 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 MPSTP25325 297 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 ARNTP27540 789 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 DSG1Q02413 1049 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 MGAT3Q09327 533 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 HNRNPDQ14103 355 aaKnown RBP16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 UGP2Q16851 508 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 AFMIDQ63HM1 303 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 IZUMO2Q6UXV1 221 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 DEFB107AQ8IZN7 70 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 LZTR1Q8N653 840 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 GPR78Q96P69 363 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 TTC1Q99614 292 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 TASP1Q9H6P5 420 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 ARHGAP26Q9UNA1 814 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 POMPQ9Y244 141 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 PATJQ8NI35 1801 aa16.32■□□□□ 0.2
HLA-DQB2-231ENST00000435145 M0QZQ0 153 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 MATN3O15232 486 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 SLC22A2O15244 555 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 FGF10O15520 208 aaPredicted RBP16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 PHGDHO43175 533 aaKnown RBP16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 GRID2O43424 1007 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 PDE5AO76074 875 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 MTTPP55157 894 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 CDC16Q13042 620 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 SLC12A1Q13621 1099 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 USP10Q14694 798 aaKnown RBP16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 RWDD4Q6NW29 188 aaKnown RBP16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 POTEHQ6S545 545 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 DHDDSQ86SQ9 333 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 FBXW8Q8N3Y1 598 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 ATPAF2Q8N5M1 289 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 CPSF7Q8N684 471 aaKnown RBP16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 C2orf69Q8N8R5 385 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 USP33Q8TEY7 942 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 PPP1R2P1Q96PQ5 205 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 MTG1Q9BT17 334 aaPredicted RBP16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 SHCBP1LQ9BZQ2 653 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 VCXQ9H320 206 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 ZDHHC7Q9NXF8 308 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 SCN10AQ9Y5Y9 1956 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 LOC100653049A0A140TA62 436 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 MAGEA13PA6NCF6 341 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 KRT34O76011 436 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 DDHD2O94830 711 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 RGS2P41220 211 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 GRIA4P48058 902 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 ERFP50548 548 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 RPL14P50914 215 aaKnown RBP16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 EPHB1P54762 984 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 NSUN2Q08J23 767 aaKnown RBP eCLIP16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 TBL3Q12788 808 aaKnown RBP16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 PRKAA1Q13131 559 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 CUL3Q13618 768 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 GDF6Q6KF10 455 aaPredicted RBP16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 RAPH1Q70E73 1250 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 SERINC5Q86VE9 423 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 LRRTM3Q86VH5 581 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 METTL23Q86XA0 190 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 MFSD6LQ8IWD5 586 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 LSMEM2Q8N112 164 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 OR10T2Q8NGX3 314 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 KCTD4Q8WVF5 259 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms