RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 SERPINB5P36952 375 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 ABL2P42684 1182 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 NUMBP49757 651 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 NKX3-2P78367 333 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 IRF9Q00978 393 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 BTKQ06187 659 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 KLF10Q13118 480 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 DSC3Q14574 896 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 GSTA3Q16772 222 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 MAP3K21Q5TCX8 1036 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 MANEALQ5VSG8 457 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 MFSD14CQ5VZR4 134 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 CAPRIN2Q6IMN6 1127 aaKnown RBP10.58□□□□□ -0.72
CD44-210ENST00000434472 PGM2L1Q6PCE3 622 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 ACAD11Q709F0 780 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 OTOP3Q7RTS5 596 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 SPATA2LQ8IUW3 424 aaPredicted RBP10.58□□□□□ -0.72
CD44-210ENST00000434472 ARHGAP12Q8IWW6 846 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 PLCD3Q8N3E9 789 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 DTX3LQ8TDB6 740 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 USP33Q8TEY7 942 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 STYXQ8WUJ0 223 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 PDCD6IPQ8WUM4 868 aaKnown RBP10.58□□□□□ -0.72
CD44-210ENST00000434472 NRG4Q8WWG1 115 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 SCYL1Q96KG9 808 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 SUSD3Q96L08 255 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 FICDQ9BVA6 458 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 GATA5Q9BWX5 397 aaPredicted RBP10.58□□□□□ -0.72
CD44-210ENST00000434472 C1QTNF1Q9BXJ1 281 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 CAB39LQ9H9S4 337 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 ZFYVE28Q9HCC9 887 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 PCDHB8Q9UN66 801 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 RUVBL2Q9Y230 463 aaKnown RBP10.58□□□□□ -0.72
CD44-210ENST00000434472 ACOT9Q9Y305 439 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 A0A0U1RQF3 1178 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 MYADML2A6NDP7 307 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 HDAC3O15379 428 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 MAFKO60675 156 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 PAGE1O75459 146 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 GLDCP23378 1020 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 BRCC3P46736 316 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 PSEN1P49768 467 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 RPL14P50914 215 aaKnown RBP10.58□□□□□ -0.72
CD44-210ENST00000434472 AFF1P51825 1210 aaKnown RBP10.58□□□□□ -0.72
CD44-210ENST00000434472 HUNKP57058 714 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 INHBEP58166 350 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 RAB10P61026 200 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 SLC25A3Q00325 362 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 CUL3Q13618 768 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 SMAD1Q15797 465 aaKnown RBP10.58□□□□□ -0.72
CD44-210ENST00000434472 AFMIDQ63HM1 303 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 SEL1L3Q68CR1 1132 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 KIAA0930Q6ICG6 404 aaPredicted RBP10.58□□□□□ -0.72
CD44-210ENST00000434472 TNS4Q8IZW8 715 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 ARHGAP18Q8N392 663 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 ZNF781Q8N8C0 355 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 FATE1Q969F0 183 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 SERPINB11Q96P15 392 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 ZNF184Q99676 751 aaPredicted RBP10.58□□□□□ -0.72
CD44-210ENST00000434472 RHOBTB2Q9BYZ6 727 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 SLC39A8Q9C0K1 460 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 SIK2Q9H0K1 926 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 S100A14Q9HCY8 104 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 TCF7L2Q9NQB0 619 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 MRGBPQ9NV56 204 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 TMLHEQ9NVH6 421 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 UBP1Q9NZI7 540 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 BCAP29Q9UHQ4 241 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 PADI3Q9ULW8 664 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 NEU3Q9UQ49 428 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 TCAF1Q9Y4C2 921 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 E2F8A0AVK6 867 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 MEI4A8MW99 385 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 MATN2O00339 956 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 INPPL1O15357 1258 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 NPHS1O60500 1241 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 POMCP01189 267 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 SLC2A3P11169 496 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 STMN1P16949 149 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 CD52P31358 61 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 ARRB2P32121 409 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 ADRA1AP35348 466 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 SLC5A3P53794 718 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 XIAPP98170 497 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 POU4F1Q01851 419 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 HERC3Q15034 1050 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 DLG2Q15700 870 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 GPR162Q16538 588 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 SLC9B1Q4ZJI4 515 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 LRRC8EQ6NSJ5 796 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 C16orf89Q6UX73 402 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 CXCL17Q6UXB2 119 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 CD300LGQ6UXG3 332 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 NAPRTQ6XQN6 538 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 KIAA0408Q6ZU52 694 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 CTU1Q7Z7A3 348 aaKnown RBP10.57□□□□□ -0.72
CD44-210ENST00000434472 RASAL3Q86YV0 1011 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 DCP1BQ8IZD4 617 aaKnown RBP10.57□□□□□ -0.72
CD44-210ENST00000434472 KIRREL3Q8IZU9 778 aa10.57□□□□□ -0.72
CD44-210ENST00000434472 CPSF7Q8N684 471 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms