RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 DCP2Q8IU60 420 aaKnown RBP15.22■□□□□ 0.03
RPUSD3-208ENST00000433972 CACTIN-AS1Q8N1I8 211 aa15.22■□□□□ 0.03
RPUSD3-208ENST00000433972 OR52K2Q8NGK3 314 aa15.22■□□□□ 0.03
RPUSD3-208ENST00000433972 OR2A12Q8NGT7 310 aa15.22■□□□□ 0.03
RPUSD3-208ENST00000433972 TSC1Q92574 1164 aa15.22■□□□□ 0.03
RPUSD3-208ENST00000433972 CEP44Q9C0F1 390 aa15.22■□□□□ 0.03
RPUSD3-208ENST00000433972 RETREG1Q9H6L5 497 aa15.22■□□□□ 0.03
RPUSD3-208ENST00000433972 IL36AQ9UHA7 158 aa15.22■□□□□ 0.03
RPUSD3-208ENST00000433972 AJAP1Q9UKB5 411 aaPredicted RBP15.22■□□□□ 0.03
RPUSD3-208ENST00000433972 IGLV3-10A0A075B6K4 115 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 CXorf51AA0A1B0GTR3 108 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 A0A1W2PQU0 124 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 TEX33O43247 280 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 CNTN5O94779 1100 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 GFPT2O94808 682 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 HNRNPA2B1P22626 353 aaKnown RBP15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 IRAK1P51617 712 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 METAP1P53582 386 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 GEMIN4P57678 1058 aaKnown RBP15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 E2F1Q01094 437 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 BNIP3Q12983 259 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 DNAJC3Q13217 504 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 NR1I3Q14994 352 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 ARL13BQ3SXY8 428 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 POM121L1PQ3SYA9 428 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 ALFQ53S48 1182 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 PIP5KL1Q5T9C9 394 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 HES3Q5TGS1 186 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 OTUD1Q5VV17 481 aaPredicted RBP15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 ERN2Q76MJ5 926 aaKnown RBP15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 HORMAD1Q86X24 394 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 SPATS2Q86XZ4 545 aaKnown RBP15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 XYLT1Q86Y38 959 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 PCDH20Q8N6Y1 951 aaKnown RBP15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 TMEM145Q8NBT3 493 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 HNRNPLLQ8WVV9 542 aaKnown RBP15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 IFT43Q96FT9 208 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 NAP1L5Q96NT1 182 aaPredicted RBP15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 TBCBQ99426 244 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 HDAC8Q9BY41 377 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 ZYG11BQ9C0D3 744 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 NRSN2Q9GZP1 204 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 KLHL11Q9NVR0 708 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 MYO6Q9UM54 1294 aa15.21■□□□□ 0.03
RPUSD3-208ENST00000433972 EIF4E1BA6NMX2 242 aaKnown RBP15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 PLK4O00444 970 aa15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 RIOK3O14730 519 aaKnown RBP15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 CBFA2T2O43439 604 aa15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 PNMA6AP0CW24 399 aaPredicted RBP15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 THEGLP0DJG4 465 aa15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 RRM1P23921 792 aa15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 ACP1P24666 158 aa15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 NEK3P51956 506 aa15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 ZNF211Q13398 564 aaPredicted RBP15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 COL9A2Q14055 689 aaPredicted RBP15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 KIAA1161Q6NSJ0 714 aa15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 C22orf39Q6P5X5 142 aa15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 LRRC69Q6ZNQ3 347 aa15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 TFAP2DQ7Z6R9 452 aa15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 ZNF683Q8IZ20 524 aa15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 BAP1Q92560 729 aa15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 IQCDQ96DY2 449 aa15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 PSMB7Q99436 277 aa15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 ANP32EQ9BTT0 268 aa15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 EDEM3Q9BZQ6 932 aa15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 PPARGC1AQ9UBK2 798 aaKnown RBP15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 AK5Q9Y6K8 562 aa15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 ANKRD11Q6UB99 2663 aaPredicted RBP15.2■□□□□ 0.02
RPUSD3-208ENST00000433972 CACNA1GO43497 2377 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 NEMP2A6NFY4 417 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 CBX4O00257 560 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 SLC31A1O15431 190 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 RRP8O43159 456 aaKnown RBP15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 SNAP91O60641 907 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 SRGAP2O75044 1071 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 PCDH8O95206 1070 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 MT-CO1P00395 513 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 CTSLP07711 333 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 FERP16591 822 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 ABCG1P45844 678 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 SERPINH1P50454 418 aaKnown RBP15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 JAM2P57087 298 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 TAS2R38P59533 333 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 RPS21P63220 83 aaKnown RBP15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 DAB2P98082 770 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 TARDBPQ13148 414 aaKnown RBP eCLIP15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 ZNF284Q2VY69 593 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 TAF3Q5VWG9 929 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 FBXL19Q6PCT2 694 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 TRIM72Q6ZMU5 477 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 KANSL1Q7Z3B3 1105 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 RFFLQ8WZ73 363 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 LRIG1Q96JA1 1093 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 SPON2Q9BUD6 331 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 USP29Q9HBJ7 922 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 ATP13A1Q9HD20 1204 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 CLCA2Q9UQC9 943 aa15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 DSPP15924 2871 aaKnown RBP15.19■□□□□ 0.02
RPUSD3-208ENST00000433972 PLXNA2O75051 1894 aa15.18■□□□□ 0.02
RPUSD3-208ENST00000433972 A0A0D9SEW6 157 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms