RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 TRBV5-7A0A0A0MS05 114 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 SLC22A23A1A5C7 686 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 LIPT2A6NK58 231 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 CEP104O60308 925 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 PAGE4O60829 102 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 CCNDBP1O95273 360 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 PGM3O95394 542 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 TUBB4AP04350 444 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 HSP90AA1P07900 732 aaKnown RBP3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 TFEBP19484 476 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 CENPAP49450 140 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 ARF3P61204 181 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 ARF1P84077 181 aaKnown RBP3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 HSF1Q00613 529 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 NHLH1Q02575 133 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 SLC18A2Q05940 514 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 MAMLD1Q13495 774 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 DCTN2Q13561 401 aaKnown RBP3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 DUSP28Q4G0W2 176 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 ARL13AQ5H913 290 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 EARS2Q5JPH6 523 aaKnown RBP3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 LCE3BQ5TA77 95 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 FAM171A1Q5VUB5 890 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 PAPD7Q5XG87 772 aaKnown RBP3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 FCRLBQ6BAA4 426 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 NCEH1Q6PIU2 408 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 PRSS45Q7RTY3 260 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 MRGPRGQ86SM5 289 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 UEVLDQ8IX04 471 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 RPAP2Q8IXW5 612 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 GPR150Q8NGU9 434 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 MAP4K1Q92918 833 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 CLMNQ96JQ2 1002 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 KLHL15Q96M94 604 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 ASB2Q96Q27 587 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 CXorf56Q9H5V9 222 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 MOV10Q9HCE1 1003 aaKnown RBP3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 CPNE5Q9HCH3 593 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 PCDHB16Q9NRJ7 776 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 HCFC1R1Q9NWW0 138 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 ADAM18Q9Y3Q7 739 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 CAPN7Q9Y6W3 813 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 NCANO14594 1321 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 PASKQ96RG2 1323 aa3.37□□□□□ -1.87
HMGB1P27-201ENST00000431429 CYP2D7A0A087X1C5 515 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 TEX13CA0A0J9YWL9 993 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 TARSL2A2RTX5 802 aaKnown RBP3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 CXorf65A6NEN9 183 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 C2CD4BA6NLJ0 364 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 LINC01548A6NM66 108 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 A8MZ25 164 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 IFNL4K9M1U5 179 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 INPPL1O15357 1258 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 TMCC2O75069 709 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 FZD7O75084 574 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 USP12O75317 370 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 TACC1O75410 805 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 OR2C1O95371 312 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 LCKP06239 509 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 GALTP07902 379 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 C6P13671 934 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 PORP16435 677 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 ZNF8P17098 575 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 RYKP34925 604 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 PSMB10P40306 273 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 HADHAP40939 763 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 UBA7P41226 1012 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 RARSP54136 660 aaKnown RBP3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 YPEL5P62699 121 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 TUBA4AP68366 448 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 OLR1P78380 273 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 DPTQ07507 201 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 TMEM115Q12893 351 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 MTA1Q13330 715 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 CUL4AQ13619 759 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 RNPS1Q15287 305 aaKnown RBP3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 ME3Q16798 604 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 CERKLQ49MI3 558 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 CC2D1BQ5T0F9 858 aaKnown RBP3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 PRAMEF17Q5VTA0 474 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 ZKSCAN2Q63HK3 967 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 SUMO4Q6EEV6 95 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 TTLL5Q6EMB2 1281 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 CDC73Q6P1J9 531 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 IL20RBQ6UXL0 311 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 CCDC129Q6ZRS4 1044 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 CPLX4Q7Z7G2 160 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 TADA2BQ86TJ2 420 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 FAM160B2Q86V87 743 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 LSMEM1Q8N8F7 131 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 SEMA6DQ8NFY4 1073 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 FAR1Q8WVX9 515 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 PIGKQ92643 395 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 CUL5Q93034 780 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 EFHD1Q9BUP0 239 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 HEMGNQ9BXL5 484 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 CCDC68Q9H2F9 335 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 PLEKHA4Q9H4M7 779 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 SLC32A1Q9H598 525 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms