RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 LONP2Q86WA8 852 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 TREML1Q86YW5 311 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 ZNF784Q8NCA9 323 aaPredicted RBP14.18□□□□□ -0.14
HOXC4-202ENST00000430889 FICDQ9BVA6 458 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 CADM1Q9BY67 442 aaKnown RBP14.18□□□□□ -0.14
HOXC4-202ENST00000430889 RHOJQ9H4E5 214 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 STN1Q9H668 368 aaKnown RBP14.18□□□□□ -0.14
HOXC4-202ENST00000430889 ENTPD7Q9NQZ7 604 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 IARS2Q9NSE4 1012 aaKnown RBP14.18□□□□□ -0.14
HOXC4-202ENST00000430889 TREX1Q9NSU2 369 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.18□□□□□ -0.14
HOXC4-202ENST00000430889 TMEM248Q9NWD8 314 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 TCAF1Q9Y4C2 921 aa14.18□□□□□ -0.14
HOXC4-202ENST00000430889 KIF3CO14782 793 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 CCDC22O60826 627 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 TADA2AO75478 443 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 MOCS2O96007 188 aaPredicted RBP14.17□□□□□ -0.14
HOXC4-202ENST00000430889 C2P06681 752 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 ZDHHC11BP0C7U3 371 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 GM2AP17900 193 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 CCND1P24385 295 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 SLC1A6P48664 564 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 AQP5P55064 265 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 MSLNQ13421 630 aaPredicted RBP14.17□□□□□ -0.14
HOXC4-202ENST00000430889 TRIP4Q15650 581 aaPredicted RBP14.17□□□□□ -0.14
HOXC4-202ENST00000430889 DLG2Q15700 870 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 CTXN3Q4LDR2 81 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 RABGAP1LQ5R372 815 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 PAXIP1Q6ZW49 1069 aaPredicted RBP14.17□□□□□ -0.14
HOXC4-202ENST00000430889 MAVSQ7Z434 540 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 TMEM151AQ8N4L1 468 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 TEX26Q8N6G2 289 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 ATAD1Q8NBU5 361 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 PIWIL2Q8TC59 973 aaKnown RBP14.17□□□□□ -0.14
HOXC4-202ENST00000430889 TADA1Q96BN2 335 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 SPATA17Q96L03 361 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 BTBD10Q9BSF8 475 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 CCDC106Q9BWC9 280 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 CRISPLD1Q9H336 500 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 CAB39LQ9H9S4 337 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 EBF2Q9HAK2 575 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 ARNT2Q9HBZ2 717 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 STARD7Q9NQZ5 370 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 RBM22Q9NW64 420 aaKnown RBP eCLIP14.17□□□□□ -0.14
HOXC4-202ENST00000430889 IPO11Q9UI26 975 aaKnown RBP14.17□□□□□ -0.14
HOXC4-202ENST00000430889 SCN5AQ14524 2016 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 A0A096LPK6 155 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 MTMR11A4FU01 709 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 DRGXA6NNA5 263 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 PEX11AO75192 247 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 INHAP05111 366 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 CPA3P15088 417 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 DNAJB1P25685 340 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 ABCG1P45844 678 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 IRF9Q00978 393 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 ZBTB16Q05516 673 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 HNRNPDQ14103 355 aaKnown RBP14.17□□□□□ -0.14
HOXC4-202ENST00000430889 GRM3Q14832 879 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 TCTN1Q2MV58 587 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 FAM171A1Q5VUB5 890 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 ZNF280DQ6N043 979 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 RSPO2Q6UXX9 243 aaPredicted RBP14.17□□□□□ -0.14
HOXC4-202ENST00000430889 IPMKQ8NFU5 416 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 SH3TC2Q8TF17 1288 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 FAM193BQ96PV7 902 aaPredicted RBP14.17□□□□□ -0.14
HOXC4-202ENST00000430889 EBF4Q9BQW3 602 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 SLC25A51Q9H1U9 297 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 COMMD8Q9NX08 183 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 MARCOQ9UEW3 520 aaPredicted RBP14.17□□□□□ -0.14
HOXC4-202ENST00000430889 DNAJC16Q9Y2G8 782 aa14.17□□□□□ -0.14
HOXC4-202ENST00000430889 BPTFQ12830 3046 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 CNTN5O94779 1100 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 RTN3O95197 1032 aaPredicted RBP14.16□□□□□ -0.14
HOXC4-202ENST00000430889 SERPINA6P08185 405 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 MMP2P08253 660 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 SBK3P0C264 359 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 POLD2P49005 469 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 SLC11A1P49279 550 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 GATMP50440 423 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 ABCE1P61221 599 aaKnown RBP14.16□□□□□ -0.14
HOXC4-202ENST00000430889 GPR17Q13304 367 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 IHHQ14623 411 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 ANO4Q32M45 955 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 ALFQ53S48 1182 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 WASHC2DQ5SRD0 308 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 RASIP1Q5U651 963 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 RINLQ6ZS11 566 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 FAM43BQ6ZT52 329 aaPredicted RBP14.16□□□□□ -0.14
HOXC4-202ENST00000430889 LCA5Q86VQ0 697 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 MFSD6LQ8IWD5 586 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 RAET1EQ8TD07 263 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 HMCESQ96FZ2 354 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 IMP4Q96G21 291 aaKnown RBP14.16□□□□□ -0.14
HOXC4-202ENST00000430889 ATXN7L3BQ96GX2 97 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 BTN2A3PQ96KV6 586 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 CAPNS2Q96L46 248 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 ZYG11BQ9C0D3 744 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 CREBZFQ9NS37 354 aa14.16□□□□□ -0.14
HOXC4-202ENST00000430889 OLA1Q9NTK5 396 aaKnown RBP14.16□□□□□ -0.14
HOXC4-202ENST00000430889 TAS2R1Q9NYW7 299 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms