RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 NACA2Q9H009 215 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 NANOGQ9H9S0 305 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 NMRAL1Q9HBL8 299 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 CPQQ9Y646 472 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 DGKBQ9Y6T7 804 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 TCRBV3S1A0A5B6 114 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 K7ERI5 159 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 NOL3O60936 208 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 CLASP2O75122 1294 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 BBOX1O75936 387 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 STBD1O95210 358 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 GPD1P21695 349 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 CA8P35219 290 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 GP5P40197 560 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 OPRL1P41146 370 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 ASPAP45381 313 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 ZNF143P52747 638 aaPredicted RBP11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 ZNF699Q32M78 642 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 ZNF618Q5T7W0 954 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 FSTL4Q6MZW2 842 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 NEPROQ6NW34 567 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 STRA8Q7Z7C7 330 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 CNTD1Q8N815 330 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 ALPK1Q96QP1 1244 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 TWNKQ96RR1 684 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 TCF12Q99081 682 aa11.25□□□□□ -0.61
SEMA4D-209ENST00000429836 RNF103-CHMP3A0A140T963 221 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 A6NL46 340 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 CLOCKO15516 846 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 PAPSS1O43252 624 aaPredicted RBP11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 RAD17O75943 681 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 ATP6V1B2P21281 511 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 GARSP41250 739 aaKnown RBP11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 GSSP48637 474 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 HERC3Q15034 1050 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 PGS1Q32NB8 556 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 Q3C1V9 767 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 FAM117BQ6P1L5 589 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 ANKFN1Q8N957 763 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 Q8N9G6 341 aaPredicted RBP11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 CLEC4DQ8WXI8 215 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 CCDC138Q96M89 665 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 FCRL3Q96P31 734 aaPredicted RBP11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 EHD1Q9H4M9 534 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 PDLIM7Q9NR12 457 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 OXSMQ9NWU1 459 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 CCDC167Q9P0B6 97 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 PTBP2Q9UKA9 531 aaKnown RBP11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 AP4E1Q9UPM8 1137 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 TMX2Q9Y320 296 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 STYXL1Q9Y6J8 313 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 BRWD3Q6RI45 1802 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 ADGRA2Q96PE1 1338 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 RGPD3A6NKT7 1758 aaPredicted RBP11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 RGPD4Q7Z3J3 1758 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 M0QYV0 167 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 KPNA4O00629 521 aaPredicted RBP11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 TRIM24O15164 1050 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 DGAT1O75907 488 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 IL18RAPO95256 599 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 C2P06681 752 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 TGM2P21980 687 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 PROZP22891 400 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 S100A1P23297 94 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 BFSP2Q13515 415 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 DNASE1L3Q13609 305 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 OXA1LQ15070 435 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 OR6B2Q6IFH4 312 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 NIPA1Q7RTP0 329 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 PIWIL3Q7Z3Z3 882 aaKnown RBP11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 CDKL3Q8IVW4 592 aaPredicted RBP11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 SPNS2Q8IVW8 549 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 NAT16Q8N8M0 369 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 MCPH1Q8NEM0 835 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 HMGCLL1Q8TB92 370 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 SYTL5Q8TDW5 730 aaPredicted RBP11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 PBXIP1Q96AQ6 731 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 MCRS1Q96EZ8 462 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 UHRF1Q96T88 793 aaPredicted RBP11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 CNPY3Q9BT09 278 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 SNRNP25Q9BV90 132 aaKnown RBP11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 ACE2Q9BYF1 805 aaPredicted RBP11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 FANCEQ9HB96 536 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 PALMDQ9NP74 551 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 PCDH12Q9NPG4 1184 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 PCDHA10Q9Y5I2 948 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 FER1L6Q2WGJ9 1857 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 TANC1Q9C0D5 1861 aa11.24□□□□□ -0.61
SEMA4D-209ENST00000429836 PFDN6O15212 129 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 GCATO75600 419 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 CLPXO76031 633 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 MICAL2O94851 1124 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 NCAM1P13591 858 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 PGAM1P18669 254 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 PTPN9P43378 593 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 PCYT1AP49585 367 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 KRT76Q01546 638 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 PRKCEQ02156 737 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 SEMA5AQ13591 1074 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 PGM5Q15124 567 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms