RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 RAET1GQ6H3X3 334 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 KRT80Q6KB66 452 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 AGMOQ6ZNB7 445 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 TLCD1Q96CP7 247 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 FAXDC2Q96IV6 333 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 PPP1R36Q96LQ0 422 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 ZYG11BQ9C0D3 744 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 CLPBQ9H078 707 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 TMEM165Q9HC07 324 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 GPSM3Q9Y4H4 160 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 NUP98P52948 1817 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 FSCN2O14926 492 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 BANF1O75531 89 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 PYGLP06737 847 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 MSH3P20585 1137 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 ADRA1DP25100 572 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 MIPP30301 263 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 RPS6KA3P51812 740 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 TAS2R40P59535 323 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 FAAP100Q0VG06 881 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 LZTR1Q8N653 840 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 DEFB119Q8N690 84 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 MTBPQ96DY7 904 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 SUSD3Q96L08 255 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 RHOBTB2Q9BYZ6 727 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 SHCBP1LQ9BZQ2 653 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 WWP1Q9H0M0 922 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 ADAM7Q9H2U9 754 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 GRHL1Q9NZI5 618 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 INSL5Q9Y5Q6 135 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 XPO1O14980 1071 aaKnown RBP10.81□□□□□ -0.68
TCOF1-204ENST00000427724 ADAMTS4O75173 837 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 CYP2A6P11509 494 aaPredicted RBP10.81□□□□□ -0.68
TCOF1-204ENST00000427724 GNSP15586 552 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 RPA3P35244 121 aaPredicted RBP10.81□□□□□ -0.68
TCOF1-204ENST00000427724 GPR1P46091 355 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 PEX5P50542 639 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 CAP1Q01518 475 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 BLMHQ13867 455 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 LACTB2Q53H82 288 aaPredicted RBP10.81□□□□□ -0.68
TCOF1-204ENST00000427724 PPP4R4Q6NUP7 873 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 ZDHHC24Q6UX98 284 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 FAM126BQ8IXS8 530 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 EZH1Q92800 747 aaPredicted RBP10.81□□□□□ -0.68
TCOF1-204ENST00000427724 NSL1Q96IY1 281 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 NECTIN4Q96NY8 510 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 CYP2S1Q96SQ9 504 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 CAPN10Q9HC96 672 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 AVENQ9NQS1 362 aaPredicted RBP10.81□□□□□ -0.68
TCOF1-204ENST00000427724 LNPEPQ9UIQ6 1025 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 MYO5AQ9Y4I1 1855 aaKnown RBP10.81□□□□□ -0.68
TCOF1-204ENST00000427724 MEIS3P2A8K0S8 358 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 AP3B1O00203 1094 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 PPEF2O14830 753 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 ETS2P15036 469 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 STX1BP61266 288 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 RPL7AP62424 266 aaKnown RBP10.81□□□□□ -0.68
TCOF1-204ENST00000427724 DDX39BQ13838 428 aaKnown RBP10.81□□□□□ -0.68
TCOF1-204ENST00000427724 TRIP10Q15642 601 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 IZUMO2Q6UXV1 221 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 PRPF39Q86UA1 669 aaKnown RBP10.81□□□□□ -0.68
TCOF1-204ENST00000427724 HDDC3Q8N4P3 179 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 ZNF366Q8N895 744 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 LEMD2Q8NC56 503 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 NETO2Q8NC67 525 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 TCP10LQ8TDR4 215 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 LRGUKQ96M69 825 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 MFSD14AQ96MC6 490 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 SFXN1Q9H9B4 322 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 COG4Q9H9E3 785 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 AAR2Q9Y312 384 aaKnown RBP10.81□□□□□ -0.68
TCOF1-204ENST00000427724 HCN4Q9Y3Q4 1203 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 TRBV23OR9-2A0A075B6M9 112 aa10.8□□□□□ -0.68
TCOF1-204ENST00000427724 SCAMP1O15126 338 aa10.8□□□□□ -0.68
TCOF1-204ENST00000427724 SUPT3HO75486 399 aa10.8□□□□□ -0.68
TCOF1-204ENST00000427724 UGT2B4P06133 528 aa10.8□□□□□ -0.68
TCOF1-204ENST00000427724 RHOP08100 348 aa10.8□□□□□ -0.68
TCOF1-204ENST00000427724 MZF1P28698 734 aaPredicted RBP10.8□□□□□ -0.68
TCOF1-204ENST00000427724 GSTT1P30711 240 aa10.8□□□□□ -0.68
TCOF1-204ENST00000427724 PTGIRP43119 386 aa10.8□□□□□ -0.68
TCOF1-204ENST00000427724 OCRLQ01968 901 aa10.8□□□□□ -0.68
TCOF1-204ENST00000427724 BOP1Q14137 746 aaKnown RBP10.8□□□□□ -0.68
TCOF1-204ENST00000427724 KPNB1Q14974 876 aaKnown RBP10.8□□□□□ -0.68
TCOF1-204ENST00000427724 PDGFRLQ15198 375 aa10.8□□□□□ -0.68
TCOF1-204ENST00000427724 TTLL9Q3SXZ7 439 aa10.8□□□□□ -0.68
TCOF1-204ENST00000427724 ICA1LQ8NDH6 482 aa10.8□□□□□ -0.68
TCOF1-204ENST00000427724 TMEM40Q8WWA1 233 aa10.8□□□□□ -0.68
TCOF1-204ENST00000427724 KLK6Q92876 244 aa10.8□□□□□ -0.68
TCOF1-204ENST00000427724 PPP1R2P1Q96PQ5 205 aa10.8□□□□□ -0.68
TCOF1-204ENST00000427724 CASS4Q9NQ75 786 aa10.8□□□□□ -0.68
TCOF1-204ENST00000427724 ZNHIT2Q9UHR6 403 aa10.8□□□□□ -0.68
TCOF1-204ENST00000427724 OGDHLQ9ULD0 1010 aa10.8□□□□□ -0.68
TCOF1-204ENST00000427724 TDRKHQ9Y2W6 561 aaKnown RBP10.8□□□□□ -0.68
TCOF1-204ENST00000427724 BUD23O43709 281 aaKnown RBP10.8□□□□□ -0.68
TCOF1-204ENST00000427724 ZNF189O75820 626 aaPredicted RBP10.8□□□□□ -0.68
TCOF1-204ENST00000427724 BGNP21810 368 aa10.8□□□□□ -0.68
TCOF1-204ENST00000427724 PPP3CCP48454 512 aa10.8□□□□□ -0.68
TCOF1-204ENST00000427724 NTHL1P78549 312 aa10.8□□□□□ -0.68
TCOF1-204ENST00000427724 USP4Q13107 963 aa10.8□□□□□ -0.68
TCOF1-204ENST00000427724 USP10Q14694 798 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms