RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 TMTC2Q8N394 836 aa5.44□□□□□ -1.54
LINC00458-202ENST00000427299 NKAPQ8N5F7 415 aaKnown RBP5.44□□□□□ -1.54
LINC00458-202ENST00000427299 MLKLQ8NB16 471 aa5.44□□□□□ -1.54
LINC00458-202ENST00000427299 ANKRD20A12PQ8NF67 263 aa5.44□□□□□ -1.54
LINC00458-202ENST00000427299 CCDC51Q96ER9 411 aa5.44□□□□□ -1.54
LINC00458-202ENST00000427299 MARK4Q96L34 752 aa5.44□□□□□ -1.54
LINC00458-202ENST00000427299 SCLT1Q96NL6 688 aa5.44□□□□□ -1.54
LINC00458-202ENST00000427299 ISCA1Q9BUE6 129 aa5.44□□□□□ -1.54
LINC00458-202ENST00000427299 FTOQ9C0B1 505 aaKnown RBP eCLIP5.44□□□□□ -1.54
LINC00458-202ENST00000427299 CIPCQ9C0C6 399 aa5.44□□□□□ -1.54
LINC00458-202ENST00000427299 NAPBQ9H115 298 aa5.44□□□□□ -1.54
LINC00458-202ENST00000427299 FOXP1Q9H334 677 aaPredicted RBP5.44□□□□□ -1.54
LINC00458-202ENST00000427299 TMOD3Q9NYL9 352 aa5.44□□□□□ -1.54
LINC00458-202ENST00000427299 ZNF69Q9UC07 566 aa5.44□□□□□ -1.54
LINC00458-202ENST00000427299 CAPN11Q9UMQ6 739 aa5.44□□□□□ -1.54
LINC00458-202ENST00000427299 GTF2A1LQ9UNN4 478 aa5.44□□□□□ -1.54
LINC00458-202ENST00000427299 HPSEQ9Y251 543 aa5.44□□□□□ -1.54
LINC00458-202ENST00000427299 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.44□□□□□ -1.54
LINC00458-202ENST00000427299 V9GYY5 206 aaPredicted RBP5.44□□□□□ -1.54
LINC00458-202ENST00000427299 LOXHD1Q8IVV2 1947 aa5.44□□□□□ -1.54
LINC00458-202ENST00000427299 COL16A1Q07092 1604 aaPredicted RBP5.44□□□□□ -1.54
LINC00458-202ENST00000427299 SYNRGQ9UMZ2 1314 aa5.44□□□□□ -1.54
LINC00458-202ENST00000427299 ATAD5Q96QE3 1844 aa5.44□□□□□ -1.54
LINC00458-202ENST00000427299 NHSQ6T4R5 1651 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 DDX60LQ5H9U9 1706 aaKnown RBP5.43□□□□□ -1.54
LINC00458-202ENST00000427299 PLA2G6O60733 806 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 A1BGP04217 495 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 CCDC175P0C221 793 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 HARSP12081 509 aaKnown RBP5.43□□□□□ -1.54
LINC00458-202ENST00000427299 PRF1P14222 555 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 FDPSP14324 419 aaKnown RBP5.43□□□□□ -1.54
LINC00458-202ENST00000427299 HSPA7P48741 367 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 HAND2P61296 217 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 AKAP17AQ02040 695 aaKnown RBP5.43□□□□□ -1.54
LINC00458-202ENST00000427299 SPAG1Q07617 926 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 POSTNQ15063 836 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 RBMS2Q15434 407 aaKnown RBP5.43□□□□□ -1.54
LINC00458-202ENST00000427299 MAPRE1Q15691 268 aaKnown RBP5.43□□□□□ -1.54
LINC00458-202ENST00000427299 CYP1B1Q16678 543 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 TRIM71Q2Q1W2 868 aaKnown RBP5.43□□□□□ -1.54
LINC00458-202ENST00000427299 ARL13BQ3SXY8 428 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 TUBB8Q3ZCM7 444 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 FILIP1LQ4L180 1135 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 LRRC24Q50LG9 513 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 ALFQ53S48 1182 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 RNASE12Q5GAN4 147 aaKnown RBP5.43□□□□□ -1.54
LINC00458-202ENST00000427299 SPECC1LQ69YQ0 1117 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 ZDHHC24Q6UX98 284 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 SYT10Q6XYQ8 523 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 KRBA2Q6ZNG9 492 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 PCGF5Q86SE9 256 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 TXLNBQ8N3L3 684 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 SDR16C5Q8N3Y7 309 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 CCDC33Q8N5R6 958 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 ZNF398Q8TD17 642 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 GOLGA1Q92805 767 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 IQCDQ96DY2 449 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 MOGAT1Q96PD6 335 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 ARFGAP3Q9NP61 516 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 GJB4Q9NTQ9 266 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 RBM28Q9NW13 759 aaKnown RBP5.43□□□□□ -1.54
LINC00458-202ENST00000427299 MAP3K20Q9NYL2 800 aaKnown RBP5.43□□□□□ -1.54
LINC00458-202ENST00000427299 CWC15Q9P013 229 aaKnown RBP5.43□□□□□ -1.54
LINC00458-202ENST00000427299 RAI14Q9P0K7 980 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 BCCIPQ9P287 314 aaKnown RBP eCLIP5.43□□□□□ -1.54
LINC00458-202ENST00000427299 FBXO9Q9UK97 447 aaPredicted RBP5.43□□□□□ -1.54
LINC00458-202ENST00000427299 CLIC4Q9Y696 253 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 ITIH6Q6UXX5 1313 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 UBN2Q6ZU65 1347 aa5.43□□□□□ -1.54
LINC00458-202ENST00000427299 AHDC1Q5TGY3 1603 aaPredicted RBP5.42□□□□□ -1.54
LINC00458-202ENST00000427299 A0A087WZ62 844 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 USP27XA6NNY8 438 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 PRR23D1E9PI22 279 aaPredicted RBP5.42□□□□□ -1.54
LINC00458-202ENST00000427299 hCG_1984214I3L0E3 225 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 ADAM10O14672 748 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 ERLIN1O75477 346 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 MMP1P03956 469 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 TMEM191BP0C7N4 346 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 PRR23D2P0DMB1 279 aaPredicted RBP5.42□□□□□ -1.54
LINC00458-202ENST00000427299 CALM1P0DP23 149 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 CALM2P0DP24 149 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 CALM3P0DP25 149 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 IFNAR1P17181 557 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 BTF3P20290 206 aaKnown RBP5.42□□□□□ -1.54
LINC00458-202ENST00000427299 MCM3P25205 808 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 CASQ1P31415 396 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 PDE6CP51160 858 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 WTAPQ15007 396 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 NPY5RQ15761 445 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 CCDC70Q6NSX1 233 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 ARMCX5Q6P1M9 558 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 SERPINA13PQ6UXR4 307 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 TOM1L2Q6ZVM7 507 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 BCDIN3DQ7Z5W3 292 aaKnown RBP5.42□□□□□ -1.54
LINC00458-202ENST00000427299 ZNF354CQ86Y25 554 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 CEP112Q8N8E3 955 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 TEX19Q8NA77 164 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.42□□□□□ -1.54
LINC00458-202ENST00000427299 SPSB4Q96A44 273 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 TMEM41AQ96HV5 264 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms