RNA–Protein interactions for RNA: ENST00000427112.6

USP40-203, Transcript of ubiquitin specific peptidase 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP40, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-203ENST00000427112 TGDSO95455 350 aa8.79□□□□□ -1
USP40-203ENST00000427112 MYCP01106 439 aaPredicted RBP8.79□□□□□ -1
USP40-203ENST00000427112 POMCP01189 267 aa8.79□□□□□ -1
USP40-203ENST00000427112 ABCD1P33897 745 aa8.79□□□□□ -1
USP40-203ENST00000427112 CDK7P50613 346 aa8.79□□□□□ -1
USP40-203ENST00000427112 PSMD7P51665 324 aa8.79□□□□□ -1
USP40-203ENST00000427112 RPS6KA3P51812 740 aa8.79□□□□□ -1
USP40-203ENST00000427112 SLC12A2P55011 1212 aa8.79□□□□□ -1
USP40-203ENST00000427112 SEMA5AQ13591 1074 aa8.79□□□□□ -1
USP40-203ENST00000427112 CYLC2Q14093 348 aaPredicted RBP8.79□□□□□ -1
USP40-203ENST00000427112 GRIK4Q16099 956 aa8.79□□□□□ -1
USP40-203ENST00000427112 ANKRD20A4Q4UJ75 823 aa8.79□□□□□ -1
USP40-203ENST00000427112 SEL1L3Q68CR1 1132 aa8.79□□□□□ -1
USP40-203ENST00000427112 FAM35AQ86V20 835 aa8.79□□□□□ -1
USP40-203ENST00000427112 CIR1Q86X95 450 aaPredicted RBP8.79□□□□□ -1
USP40-203ENST00000427112 SCN4BQ8IWT1 228 aa8.79□□□□□ -1
USP40-203ENST00000427112 FSTL5Q8N475 847 aaPredicted RBP8.79□□□□□ -1
USP40-203ENST00000427112 APPL2Q8NEU8 664 aa8.79□□□□□ -1
USP40-203ENST00000427112 ILKAPQ9H0C8 392 aaPredicted RBP8.79□□□□□ -1
USP40-203ENST00000427112 TKTL2Q9H0I9 626 aa8.79□□□□□ -1
USP40-203ENST00000427112 KPNA7A9QM74 516 aa8.79□□□□□ -1
USP40-203ENST00000427112 MAN1A2O60476 641 aa8.79□□□□□ -1
USP40-203ENST00000427112 KLHL2O95198 593 aa8.79□□□□□ -1
USP40-203ENST00000427112 YBX3P16989 372 aaKnown RBP eCLIP8.79□□□□□ -1
USP40-203ENST00000427112 GGT5P36269 586 aa8.79□□□□□ -1
USP40-203ENST00000427112 PGFP49763 221 aa8.79□□□□□ -1
USP40-203ENST00000427112 RAP1GDS1P52306 607 aa8.79□□□□□ -1
USP40-203ENST00000427112 AP3M2P53677 418 aa8.79□□□□□ -1
USP40-203ENST00000427112 COL9A2Q14055 689 aaPredicted RBP8.79□□□□□ -1
USP40-203ENST00000427112 FBXO47Q5MNV8 452 aa8.79□□□□□ -1
USP40-203ENST00000427112 FKBP1CQ5VVH2 108 aa8.79□□□□□ -1
USP40-203ENST00000427112 ITPRIPL1Q6GPH6 555 aa8.79□□□□□ -1
USP40-203ENST00000427112 BNC2Q6ZN30 1099 aaPredicted RBP8.79□□□□□ -1
USP40-203ENST00000427112 METTL25Q8N6Q8 603 aa8.79□□□□□ -1
USP40-203ENST00000427112 ARRDC4Q8NCT1 418 aa8.79□□□□□ -1
USP40-203ENST00000427112 HSPBAP1Q96EW2 488 aa8.79□□□□□ -1
USP40-203ENST00000427112 CDH19Q9H159 772 aa8.79□□□□□ -1
USP40-203ENST00000427112 BCLAF3A2AJT9 711 aaKnown RBP8.78□□□□□ -1
USP40-203ENST00000427112 C19orf81C9J6K1 198 aa8.78□□□□□ -1
USP40-203ENST00000427112 RNASEH2AO75792 299 aaKnown RBP8.78□□□□□ -1
USP40-203ENST00000427112 SUPT7LO94864 414 aa8.78□□□□□ -1
USP40-203ENST00000427112 SIX3O95343 332 aaPredicted RBP8.78□□□□□ -1
USP40-203ENST00000427112 NCK1P16333 377 aa8.78□□□□□ -1
USP40-203ENST00000427112 BDNFP23560 247 aa8.78□□□□□ -1
USP40-203ENST00000427112 PTPN3P26045 913 aa8.78□□□□□ -1
USP40-203ENST00000427112 FDFT1P37268 417 aa8.78□□□□□ -1
USP40-203ENST00000427112 GARSP41250 739 aaKnown RBP8.78□□□□□ -1
USP40-203ENST00000427112 PTK2BQ14289 1009 aa8.78□□□□□ -1
USP40-203ENST00000427112 LBRQ14739 615 aaKnown RBP8.78□□□□□ -1
USP40-203ENST00000427112 PTPRRQ15256 657 aa8.78□□□□□ -1
USP40-203ENST00000427112 ZIK1Q3SY52 487 aaPredicted RBP8.78□□□□□ -1
USP40-203ENST00000427112 KRT80Q6KB66 452 aa8.78□□□□□ -1
USP40-203ENST00000427112 XRRA1Q6P2D8 792 aa8.78□□□□□ -1
USP40-203ENST00000427112 CNSTQ6PJW8 725 aa8.78□□□□□ -1
USP40-203ENST00000427112 DDIASQ8IXT1 998 aa8.78□□□□□ -1
USP40-203ENST00000427112 PQLC1Q8N2U9 271 aa8.78□□□□□ -1
USP40-203ENST00000427112 PAF1Q8N7H5 531 aa8.78□□□□□ -1
USP40-203ENST00000427112 KYQ8NBH2 561 aa8.78□□□□□ -1
USP40-203ENST00000427112 FNIP1Q8TF40 1166 aa8.78□□□□□ -1
USP40-203ENST00000427112 FAM167AQ96KS9 214 aa8.78□□□□□ -1
USP40-203ENST00000427112 KCNA7Q96RP8 456 aa8.78□□□□□ -1
USP40-203ENST00000427112 POMKQ9H5K3 350 aa8.78□□□□□ -1
USP40-203ENST00000427112 SARS2Q9NP81 518 aaKnown RBP8.78□□□□□ -1
USP40-203ENST00000427112 MOCS1Q9NZB8 636 aa8.78□□□□□ -1
USP40-203ENST00000427112 ACTL7AQ9Y615 435 aa8.78□□□□□ -1
USP40-203ENST00000427112 LTBP1Q14766 1721 aa8.78□□□□□ -1
USP40-203ENST00000427112 IL18RAPO95256 599 aa8.78□□□□□ -1
USP40-203ENST00000427112 AHSGP02765 367 aa8.78□□□□□ -1
USP40-203ENST00000427112 PCNAP12004 261 aa8.78□□□□□ -1
USP40-203ENST00000427112 PGAM1P18669 254 aa8.78□□□□□ -1
USP40-203ENST00000427112 SPRP35270 261 aaPredicted RBP8.78□□□□□ -1
USP40-203ENST00000427112 STT3AP46977 705 aa8.78□□□□□ -1
USP40-203ENST00000427112 CHN2P52757 468 aa8.78□□□□□ -1
USP40-203ENST00000427112 NSUN2Q08J23 767 aaKnown RBP eCLIP8.78□□□□□ -1
USP40-203ENST00000427112 PLCL1Q15111 1095 aa8.78□□□□□ -1
USP40-203ENST00000427112 MYLK3Q32MK0 819 aa8.78□□□□□ -1
USP40-203ENST00000427112 LDLRAP1Q5SW96 308 aa8.78□□□□□ -1
USP40-203ENST00000427112 NANOGNBQ7Z5D8 188 aa8.78□□□□□ -1
USP40-203ENST00000427112 CHST13Q8NET6 341 aa8.78□□□□□ -1
USP40-203ENST00000427112 CYGBQ8WWM9 190 aa8.78□□□□□ -1
USP40-203ENST00000427112 ZBED3Q96IU2 234 aaPredicted RBP8.78□□□□□ -1
USP40-203ENST00000427112 GAD1Q99259 594 aa8.78□□□□□ -1
USP40-203ENST00000427112 COQ10BQ9H8M1 238 aa8.78□□□□□ -1
USP40-203ENST00000427112 PLEKHA5Q9HAU0 1116 aa8.78□□□□□ -1
USP40-203ENST00000427112 VCX3AQ9NNX9 186 aa8.78□□□□□ -1
USP40-203ENST00000427112 PDP2Q9P2J9 529 aa8.78□□□□□ -1
USP40-203ENST00000427112 PAIP2BQ9ULR5 123 aaKnown RBP8.78□□□□□ -1
USP40-203ENST00000427112 USP22Q9UPT9 525 aa8.78□□□□□ -1
USP40-203ENST00000427112 PTPRFP10586 1907 aa8.78□□□□□ -1
USP40-203ENST00000427112 E7ENX8 843 aa8.78□□□□□ -1
USP40-203ENST00000427112 GNAO1P09471 354 aa8.78□□□□□ -1
USP40-203ENST00000427112 CYP2C9P11712 490 aa8.78□□□□□ -1
USP40-203ENST00000427112 ATICP31939 592 aa8.78□□□□□ -1
USP40-203ENST00000427112 SLC18A1P54219 525 aa8.78□□□□□ -1
USP40-203ENST00000427112 ARHGAP22Q7Z5H3 698 aa8.78□□□□□ -1
USP40-203ENST00000427112 ZNF786Q8N393 782 aa8.78□□□□□ -1
USP40-203ENST00000427112 DNERQ8NFT8 737 aa8.78□□□□□ -1
USP40-203ENST00000427112 OR10Q1Q8NGQ4 319 aa8.78□□□□□ -1
USP40-203ENST00000427112 OPTNQ96CV9 577 aa8.78□□□□□ -1
USP40-203ENST00000427112 HDAC11Q96DB2 347 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms