RNA–Protein interactions for RNA: ENST00000425441.5

CCDC12-202, Transcript of coiled-coil domain containing 12, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC12, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-202ENST00000425441 IRF2BP2Q7Z5L9 587 aa13.5□□□□□ -0.25
CCDC12-202ENST00000425441 TRIM69Q86WT6 500 aa13.5□□□□□ -0.25
CCDC12-202ENST00000425441 DRC7Q8IY82 874 aa13.5□□□□□ -0.25
CCDC12-202ENST00000425441 DEFB106AQ8N104 65 aa13.5□□□□□ -0.25
CCDC12-202ENST00000425441 SYN2Q92777 582 aaPredicted RBP13.5□□□□□ -0.25
CCDC12-202ENST00000425441 CCDC114Q96M63 670 aa13.5□□□□□ -0.25
CCDC12-202ENST00000425441 SLC2A13Q96QE2 648 aa13.5□□□□□ -0.25
CCDC12-202ENST00000425441 HAUS4Q9H6D7 363 aa13.5□□□□□ -0.25
CCDC12-202ENST00000425441 SEPT11Q9NVA2 429 aaKnown RBP13.5□□□□□ -0.25
CCDC12-202ENST00000425441 CHD6Q8TD26 2715 aa13.5□□□□□ -0.25
CCDC12-202ENST00000425441 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.49□□□□□ -0.25
CCDC12-202ENST00000425441 PRAMEF26H0Y7S4 382 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 WNT9AO14904 365 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 ATP9BO43861 1147 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 RNGTTO60942 597 aaKnown RBP13.49□□□□□ -0.25
CCDC12-202ENST00000425441 LSM8O95777 96 aaKnown RBP13.49□□□□□ -0.25
CCDC12-202ENST00000425441 CKMT2P17540 419 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 CHRNB2P17787 502 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 CDH5P33151 784 aaPredicted RBP13.49□□□□□ -0.25
CCDC12-202ENST00000425441 PPP2CBP62714 309 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 PPP2CAP67775 309 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 NOMO3P69849 1222 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 KRT83P78385 493 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 ZNF177Q13360 481 aaPredicted RBP13.49□□□□□ -0.25
CCDC12-202ENST00000425441 HS1BP3Q53T59 392 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 HES3Q5TGS1 186 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 HGSNATQ68CP4 663 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 CXorf57Q6NSI4 855 aaKnown RBP13.49□□□□□ -0.25
CCDC12-202ENST00000425441 FBXL22Q6P050 247 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 CACTIN-AS1Q8N1I8 211 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 SPC24Q8NBT2 197 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 FRS2Q8WU20 508 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 TSC1Q92574 1164 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 AGPAT1Q99943 283 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 SYT11Q9BT88 431 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 NRSN2Q9GZP1 204 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 AK5Q9Y6K8 562 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 AKAP13Q12802 2813 aa13.49□□□□□ -0.25
CCDC12-202ENST00000425441 SYNJ2BP-COX16A0A087WUM0 186 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 FAM170AA1A519 330 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 CBX4O00257 560 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 MCF2LO15068 1137 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 RRP8O43159 456 aaKnown RBP13.48□□□□□ -0.25
CCDC12-202ENST00000425441 RTN2O75298 545 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 CLDN11O75508 207 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 SERPING1P05155 500 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 SKILP12757 684 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 VAV1P15498 845 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 HNRNPH3P31942 346 aaKnown RBP13.48□□□□□ -0.25
CCDC12-202ENST00000425441 CDH4P55283 916 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 PITX1P78337 314 aaPredicted RBP13.48□□□□□ -0.25
CCDC12-202ENST00000425441 BNIP3Q12983 259 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 AUHQ13825 339 aaKnown RBP13.48□□□□□ -0.25
CCDC12-202ENST00000425441 DLG2Q15700 870 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 NAA35Q5VZE5 725 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 FBXL19Q6PCT2 694 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 TRIM72Q6ZMU5 477 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 ZNF571Q7Z3V5 609 aaPredicted RBP13.48□□□□□ -0.25
CCDC12-202ENST00000425441 CIR1Q86X95 450 aaPredicted RBP13.48□□□□□ -0.25
CCDC12-202ENST00000425441 SH2D3CQ8N5H7 860 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 TC2NQ8N9U0 490 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 TMEM35BQ8NCS4 154 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 OR8K1Q8NGG5 319 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 PIP4K2CQ8TBX8 421 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 KLHDC7BQ96G42 594 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 PPP1R13BQ96KQ4 1090 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 UBL7Q96S82 380 aaPredicted RBP13.48□□□□□ -0.25
CCDC12-202ENST00000425441 PREBQ9HCU5 417 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 TMEM51Q9NW97 253 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 RRN3Q9NYV6 651 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 COX16Q9P0S2 106 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 ARHGAP20Q9P2F6 1191 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 VPS28Q9UK41 221 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 VANGL2Q9ULK5 521 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 PPM1HQ9ULR3 514 aa13.48□□□□□ -0.25
CCDC12-202ENST00000425441 GOLGA6L6A8MZA4 724 aa13.47□□□□□ -0.25
CCDC12-202ENST00000425441 DAB1O75553 588 aa13.47□□□□□ -0.25
CCDC12-202ENST00000425441 CYP1A1P04798 512 aaPredicted RBP13.47□□□□□ -0.25
CCDC12-202ENST00000425441 PLEKP08567 350 aaPredicted RBP13.47□□□□□ -0.25
CCDC12-202ENST00000425441 MAT2AP31153 395 aaKnown RBP13.47□□□□□ -0.25
CCDC12-202ENST00000425441 NOS2P35228 1153 aa13.47□□□□□ -0.25
CCDC12-202ENST00000425441 E2F1Q01094 437 aa13.47□□□□□ -0.25
CCDC12-202ENST00000425441 CENPCQ03188 943 aa13.47□□□□□ -0.25
CCDC12-202ENST00000425441 CNTN1Q12860 1018 aa13.47□□□□□ -0.25
CCDC12-202ENST00000425441 TARDBPQ13148 414 aaKnown RBP eCLIP13.47□□□□□ -0.25
CCDC12-202ENST00000425441 RTP5Q14D33 572 aa13.47□□□□□ -0.25
CCDC12-202ENST00000425441 TAF5Q15542 800 aa13.47□□□□□ -0.25
CCDC12-202ENST00000425441 CLEC16AQ2KHT3 1053 aa13.47□□□□□ -0.25
CCDC12-202ENST00000425441 PTPN20Q4JDL3 420 aa13.47□□□□□ -0.25
CCDC12-202ENST00000425441 AGBL4Q5VU57 503 aa13.47□□□□□ -0.25
CCDC12-202ENST00000425441 OR6B2Q6IFH4 312 aa13.47□□□□□ -0.25
CCDC12-202ENST00000425441 NEK5Q6P3R8 708 aa13.47□□□□□ -0.25
CCDC12-202ENST00000425441 WDR59Q6PJI9 974 aa13.47□□□□□ -0.25
CCDC12-202ENST00000425441 KANSL1Q7Z3B3 1105 aa13.47□□□□□ -0.25
CCDC12-202ENST00000425441 SPATS2Q86XZ4 545 aaKnown RBP13.47□□□□□ -0.25
CCDC12-202ENST00000425441 WDTC1Q8N5D0 677 aa13.47□□□□□ -0.25
CCDC12-202ENST00000425441 ALG14Q96F25 216 aa13.47□□□□□ -0.25
CCDC12-202ENST00000425441 CPXM1Q96SM3 734 aa13.47□□□□□ -0.25
CCDC12-202ENST00000425441 PCDHB18PQ96TA0 734 aa13.47□□□□□ -0.25
CCDC12-202ENST00000425441 FEM1AQ9BSK4 669 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms