RNA–Protein interactions for RNA: ENST00000423723.1

NCDN-204, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-204ENST00000423723 FEM1AQ9BSK4 669 aa11.9□□□□□ -0.5
NCDN-204ENST00000423723 TKTL2Q9H0I9 626 aa11.9□□□□□ -0.5
NCDN-204ENST00000423723 OSBPL2Q9H1P3 480 aa11.9□□□□□ -0.5
NCDN-204ENST00000423723 CTTNBP2NLQ9P2B4 639 aa11.9□□□□□ -0.5
NCDN-204ENST00000423723 PPARGC1AQ9UBK2 798 aaKnown RBP11.9□□□□□ -0.5
NCDN-204ENST00000423723 SCML1Q9UN30 329 aa11.9□□□□□ -0.5
NCDN-204ENST00000423723 ERVW-1Q9UQF0 538 aa11.9□□□□□ -0.5
NCDN-204ENST00000423723 PCNX2A6NKB5 2137 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 TNRC6BQ9UPQ9 1833 aaKnown RBP11.89□□□□□ -0.51
NCDN-204ENST00000423723 GOLGA6L10A0A0M3HER8 536 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 H0Y626 953 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 CDX4O14627 284 aaPredicted RBP11.89□□□□□ -0.51
NCDN-204ENST00000423723 MAP3K13O43283 966 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 ATP9BO43861 1147 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 CYP1A2P05177 515 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 HLA-EP13747 358 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 MZF1P28698 734 aaPredicted RBP11.89□□□□□ -0.51
NCDN-204ENST00000423723 RDXP35241 583 aaKnown RBP11.89□□□□□ -0.51
NCDN-204ENST00000423723 ADRA1BP35368 520 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 CARSP49589 748 aaKnown RBP11.89□□□□□ -0.51
NCDN-204ENST00000423723 SULT1E1P49888 294 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 IRAK1P51617 712 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 RNASE9P60153 205 aaKnown RBP11.89□□□□□ -0.51
NCDN-204ENST00000423723 RPS14P62263 151 aaKnown RBP11.89□□□□□ -0.51
NCDN-204ENST00000423723 ECT2LQ008S8 904 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 DEUP1Q05D60 604 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 MANEALQ5VSG8 457 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 PPP1R2P3Q6NXS1 205 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 USP30Q70CQ3 517 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 CYP2U1Q7Z449 544 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 CCDC117Q8IWD4 279 aaPredicted RBP11.89□□□□□ -0.51
NCDN-204ENST00000423723 CARNMT1Q8N4J0 409 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 CEP76Q8TAP6 659 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 RXFP2Q8WXD0 754 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 PRCCQ92733 491 aaPredicted RBP11.89□□□□□ -0.51
NCDN-204ENST00000423723 FOXJ1Q92949 421 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 RNF34Q969K3 372 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 PKNOX2Q96KN3 472 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 RPRD1AQ96P16 312 aaPredicted RBP11.89□□□□□ -0.51
NCDN-204ENST00000423723 RUFY1Q96T51 708 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 FAM129BQ96TA1 746 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 CAPN10Q9HC96 672 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 CD93Q9NPY3 652 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 ADAM22Q9P0K1 906 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 UVRAGQ9P2Y5 699 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 SLCO3A1Q9UIG8 710 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 NFU1Q9UMS0 254 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 CYP8B1Q9UNU6 501 aa11.89□□□□□ -0.51
NCDN-204ENST00000423723 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.88□□□□□ -0.51
NCDN-204ENST00000423723 LNP1A1A4G5 178 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 METTL12A8MUP2 240 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 KHNYNO15037 678 aaKnown RBP11.88□□□□□ -0.51
NCDN-204ENST00000423723 CNTN5O94779 1100 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 CALB1P05937 261 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 SERPINF2P08697 491 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 KRT3P12035 628 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 ITPKAP23677 461 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 CTNNA2P26232 953 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 RFC1P35251 1148 aaPredicted RBP11.88□□□□□ -0.51
NCDN-204ENST00000423723 HSPA9P38646 679 aaKnown RBP11.88□□□□□ -0.51
NCDN-204ENST00000423723 CTSOP43234 321 aaPredicted RBP11.88□□□□□ -0.51
NCDN-204ENST00000423723 LMAN1P49257 510 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 DHPSP49366 369 aaPredicted RBP11.88□□□□□ -0.51
NCDN-204ENST00000423723 IRX4P78413 519 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 MRPS25P82663 173 aaKnown RBP11.88□□□□□ -0.51
NCDN-204ENST00000423723 RPL6Q02878 288 aaKnown RBP11.88□□□□□ -0.51
NCDN-204ENST00000423723 SCAPQ12770 1279 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 NUMA1Q14980 2115 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 CCDC6Q16204 474 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 FNDC3BQ53EP0 1204 aaKnown RBP11.88□□□□□ -0.51
NCDN-204ENST00000423723 STPG1Q5TH74 334 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 LYSMD4Q5XG99 296 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 ACAD10Q6JQN1 1059 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 RABEPKQ7Z6M1 372 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 SETD3Q86TU7 594 aaPredicted RBP11.88□□□□□ -0.51
NCDN-204ENST00000423723 MCOLN2Q8IZK6 566 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 C12orf50Q8NA57 414 aaPredicted RBP11.88□□□□□ -0.51
NCDN-204ENST00000423723 TSEN2Q8NCE0 465 aaKnown RBP11.88□□□□□ -0.51
NCDN-204ENST00000423723 JOSD2Q8TAC2 188 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 IFT81Q8WYA0 676 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 SEC14L1Q92503 715 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 NTAN1Q96AB6 310 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 TRIM11Q96F44 468 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 TOE1Q96GM8 510 aaKnown RBP11.88□□□□□ -0.51
NCDN-204ENST00000423723 CFAP57Q96MR6 1250 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 GDAP1L1Q96MZ0 367 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 C11orf70Q9BRQ4 267 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 FAM114A2Q9NRY5 505 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 CDV3Q9UKY7 258 aaKnown RBP11.88□□□□□ -0.51
NCDN-204ENST00000423723 VANGL2Q9ULK5 521 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 SLC6A14Q9UN76 642 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 HS3ST2Q9Y278 367 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 ALG6Q9Y672 507 aa11.88□□□□□ -0.51
NCDN-204ENST00000423723 ASCC3Q8N3C0 2202 aaKnown RBP11.88□□□□□ -0.51
NCDN-204ENST00000423723 SYNJ2BP-COX16A0A087WUM0 186 aa11.87□□□□□ -0.51
NCDN-204ENST00000423723 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.87□□□□□ -0.51
NCDN-204ENST00000423723 EDDM13A0A1B0GTR0 161 aa11.87□□□□□ -0.51
NCDN-204ENST00000423723 FAM187AA6NFU0 413 aa11.87□□□□□ -0.51
NCDN-204ENST00000423723 UPK3BL1B0FP48 263 aa11.87□□□□□ -0.51
NCDN-204ENST00000423723 UPK3BL2E5RIL1 263 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms