RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 DYRK4Q9NR20 520 aa9.88□□□□□ -0.83
HERC3-204ENST00000422770 KLHL11Q9NVR0 708 aa9.88□□□□□ -0.83
HERC3-204ENST00000422770 FBXL12Q9NXK8 326 aa9.88□□□□□ -0.83
HERC3-204ENST00000422770 USP36Q9P275 1121 aaKnown RBP9.88□□□□□ -0.83
HERC3-204ENST00000422770 UVRAGQ9P2Y5 699 aa9.88□□□□□ -0.83
HERC3-204ENST00000422770 SALL4Q9UJQ4 1053 aa9.88□□□□□ -0.83
HERC3-204ENST00000422770 FCF1Q9Y324 198 aaKnown RBP9.88□□□□□ -0.83
HERC3-204ENST00000422770 OR51B4Q9Y5P0 310 aa9.88□□□□□ -0.83
HERC3-204ENST00000422770 ACTL7AQ9Y615 435 aa9.88□□□□□ -0.83
HERC3-204ENST00000422770 DUSP10Q9Y6W6 482 aa9.88□□□□□ -0.83
HERC3-204ENST00000422770 RIF1Q5UIP0 2472 aaKnown RBP9.88□□□□□ -0.83
HERC3-204ENST00000422770 A0A0A6YYK5 440 aaPredicted RBP9.87□□□□□ -0.83
HERC3-204ENST00000422770 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.87□□□□□ -0.83
HERC3-204ENST00000422770 BCLAF3A2AJT9 711 aaKnown RBP9.87□□□□□ -0.83
HERC3-204ENST00000422770 GRID2IPA4D2P6 1211 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 BTNL10A8MVZ5 291 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 PATE3B3GLJ2 98 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 RASA4BC9J798 803 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 RASA4O43374 803 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 SMAD6O43541 496 aaKnown RBP9.87□□□□□ -0.83
HERC3-204ENST00000422770 ATP9BO43861 1147 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 FSBPO95073 299 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 SEMA4FO95754 770 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 FTCDO95954 541 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 ITPKAP23677 461 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 IL1R2P27930 398 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 PCK1P35558 622 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 SERPINH1P50454 418 aaKnown RBP9.87□□□□□ -0.83
HERC3-204ENST00000422770 CDH6P55285 790 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 GEMIN4P57678 1058 aaKnown RBP9.87□□□□□ -0.83
HERC3-204ENST00000422770 GNG11P61952 73 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 CSRP2Q16527 193 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 ODF2Q5BJF6 829 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 ZNF569Q5MCW4 686 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 DCAF12L1Q5VU92 463 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 PRR23CQ6ZRP0 262 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 RFX8Q6ZV50 586 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 SLC35F6Q8N357 371 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 GPR161Q8N6U8 529 aaKnown RBP9.87□□□□□ -0.83
HERC3-204ENST00000422770 PAF1Q8N7H5 531 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 NETO2Q8NC67 525 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 PIP4K2CQ8TBX8 421 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 CALN1Q9BXU9 219 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 ZDHHC6Q9H6R6 413 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 PARD6AQ9NPB6 346 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 VPS45Q9NRW7 570 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 DONSONQ9NYP3 566 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 WSB2Q9NYS7 404 aaPredicted RBP9.87□□□□□ -0.83
HERC3-204ENST00000422770 NEU3Q9UQ49 428 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 HS3ST2Q9Y278 367 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 PCDHGA5Q9Y5G8 931 aa9.87□□□□□ -0.83
HERC3-204ENST00000422770 PI4KAP42356 2102 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 FAM186AA6NE01 2351 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 ARHGAP42A6NI28 874 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 KHNYNO15037 678 aaKnown RBP9.86□□□□□ -0.83
HERC3-204ENST00000422770 SPOPO43791 374 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 BUB1BO60566 1050 aaPredicted RBP9.86□□□□□ -0.83
HERC3-204ENST00000422770 LRP3O75074 770 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 PALMO75781 387 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 PROSCO94903 275 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 RARAP10276 462 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 ERCC2P18074 760 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 C5AR1P21730 350 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 AMPD1P23109 780 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 MAOBP27338 520 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 CHRNA3P32297 505 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 ACSL1P33121 698 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 HTR7P34969 479 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 CLCN6P51797 869 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 METAP1P53582 386 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 RHOAP61586 193 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 ARF5P84085 180 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 LMNB2Q03252 620 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 ZBTB16Q05516 673 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 SEMA3BQ13214 749 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 BOLA3Q53S33 107 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 TRIM61Q5EBN2 209 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 WDR45BQ5MNZ6 344 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 FAM46CQ5VWP2 391 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 TXNRD3NBQ6F5E7 133 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 C11orf63Q6NUN7 778 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.86□□□□□ -0.83
HERC3-204ENST00000422770 ZNF662Q6ZS27 426 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 METTL3Q86U44 580 aaKnown RBP9.86□□□□□ -0.83
HERC3-204ENST00000422770 CPNE8Q86YQ8 564 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 SYT12Q8IV01 421 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 SLC41A1Q8IVJ1 513 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 NIPA2Q8N8Q9 360 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 KCTD6Q8NC69 237 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 OR6K2Q8NGY2 324 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 OR14C36Q8NHC7 312 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 TPCN2Q8NHX9 752 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 SLC35G2Q8TBE7 412 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 FRS2Q8WU20 508 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 TMEM131Q92545 1883 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 ZNF592Q92610 1267 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 FOXJ1Q92949 421 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 FAM129BQ96TA1 746 aa9.86□□□□□ -0.83
HERC3-204ENST00000422770 NUSAP1Q9BXS6 441 aaKnown RBP9.86□□□□□ -0.83
HERC3-204ENST00000422770 C6orf106Q9H6K1 298 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms