RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 LSM3P62310 102 aaKnown RBP14.09□□□□□ -0.15
CLTCL1-201ENST00000412649 TNFAIP1Q13829 316 aa14.09□□□□□ -0.15
CLTCL1-201ENST00000412649 SULF1Q8IWU6 871 aa14.09□□□□□ -0.15
CLTCL1-201ENST00000412649 ZNF420Q8TAQ5 688 aaPredicted RBP14.09□□□□□ -0.15
CLTCL1-201ENST00000412649 PNPT1Q8TCS8 783 aaKnown RBP14.09□□□□□ -0.15
CLTCL1-201ENST00000412649 KCTD4Q8WVF5 259 aa14.09□□□□□ -0.15
CLTCL1-201ENST00000412649 DACT3Q96B18 629 aaPredicted RBP14.09□□□□□ -0.15
CLTCL1-201ENST00000412649 APOBEC3GQ9HC16 384 aaKnown RBP14.09□□□□□ -0.15
CLTCL1-201ENST00000412649 TSPAN16Q9UKR8 245 aa14.09□□□□□ -0.15
CLTCL1-201ENST00000412649 KCNK1O00180 336 aa14.09□□□□□ -0.15
CLTCL1-201ENST00000412649 FGF3P11487 239 aaPredicted RBP14.09□□□□□ -0.15
CLTCL1-201ENST00000412649 ALOX12P18054 663 aa14.09□□□□□ -0.15
CLTCL1-201ENST00000412649 EPGNQ6UW88 154 aa14.09□□□□□ -0.15
CLTCL1-201ENST00000412649 SIX5Q8N196 739 aa14.09□□□□□ -0.15
CLTCL1-201ENST00000412649 TTC30BQ8N4P2 665 aa14.09□□□□□ -0.15
CLTCL1-201ENST00000412649 BEST2Q8NFU1 509 aa14.09□□□□□ -0.15
CLTCL1-201ENST00000412649 AZIN2Q96A70 460 aa14.09□□□□□ -0.15
CLTCL1-201ENST00000412649 PDCD2LQ9BRP1 358 aa14.09□□□□□ -0.15
CLTCL1-201ENST00000412649 TBC1D13Q9NVG8 400 aa14.09□□□□□ -0.15
CLTCL1-201ENST00000412649 CEPT1Q9Y6K0 416 aa14.09□□□□□ -0.15
CLTCL1-201ENST00000412649 CICQ96RK0 1608 aaPredicted RBP14.09□□□□□ -0.15
CLTCL1-201ENST00000412649 SPTLC1O15269 473 aa14.08□□□□□ -0.15
CLTCL1-201ENST00000412649 SNNO75324 88 aaPredicted RBP14.08□□□□□ -0.15
CLTCL1-201ENST00000412649 MLNP12872 115 aa14.08□□□□□ -0.15
CLTCL1-201ENST00000412649 CSE1LP55060 971 aaKnown RBP14.08□□□□□ -0.15
CLTCL1-201ENST00000412649 MERTKQ12866 999 aa14.08□□□□□ -0.15
CLTCL1-201ENST00000412649 CAPRIN1Q14444 709 aaKnown RBP14.08□□□□□ -0.15
CLTCL1-201ENST00000412649 HERC3Q15034 1050 aa14.08□□□□□ -0.15
CLTCL1-201ENST00000412649 RBBP7Q16576 425 aa14.08□□□□□ -0.15
CLTCL1-201ENST00000412649 PAGE2BQ5JRK9 111 aa14.08□□□□□ -0.15
CLTCL1-201ENST00000412649 SLC22A9Q8IVM8 553 aa14.08□□□□□ -0.15
CLTCL1-201ENST00000412649 PLEKHA5Q9HAU0 1116 aa14.08□□□□□ -0.15
CLTCL1-201ENST00000412649 XPR1Q9UBH6 696 aa14.08□□□□□ -0.15
CLTCL1-201ENST00000412649 CNOT6Q9ULM6 557 aaKnown RBP14.08□□□□□ -0.15
CLTCL1-201ENST00000412649 DFFAO00273 331 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 PLK1P53350 603 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 STRIP1Q5VSL9 837 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 PTF1AQ7RTS3 328 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 P3H2Q8IVL5 708 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 SLC4A11Q8NBS3 891 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 TMIGD2Q96BF3 282 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 DHRS4Q9BTZ2 278 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 REXO4Q9GZR2 422 aaKnown RBP14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 CYP3A43Q9HB55 503 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 MKS1Q9NXB0 559 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 BMP10O95393 424 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 IL1R2P27930 398 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 MRPS5P82675 430 aaKnown RBP14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 OGDHQ02218 1023 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 DGCR6Q14129 220 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 PGM5Q15124 567 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 C1orf220Q5T0J3 134 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 CCNYL2Q5T2Q4 361 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 TMEM198Q66K66 360 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 APOBEC3HQ6NTF7 200 aaKnown RBP14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 SPPL2CQ8IUH8 684 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 CENPNQ96H22 339 aaPredicted RBP14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 CPXM1Q96SM3 734 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 OMDQ99983 421 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 EBF1Q9UH73 591 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 CAMTA1Q9Y6Y1 1673 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 PDZK1P1A8MUH7 402 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 MED26O95402 600 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 ST13P50502 369 aaKnown RBP14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 TOP3AQ13472 1001 aaPredicted RBP14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 PCLAFQ15004 111 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 EML3Q32P44 896 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 ANKRD52Q8NB46 1076 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 CHID1Q9BWS9 393 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 PCDH12Q9NPG4 1184 aa14.08□□□□□ -0.16
CLTCL1-201ENST00000412649 MYO1GB0I1T2 1018 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 VWA5AO00534 786 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 HTRA2O43464 458 aaPredicted RBP14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 TADA2AO75478 443 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 GRIA2P42262 883 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 RPS9P46781 194 aaKnown RBP14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 RHDQ02161 417 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 EPS8Q12929 822 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 TRAF3Q13114 568 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 UTS2BQ765I0 119 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 KRT27Q7Z3Y8 459 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 MINDY2Q8NBR6 621 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 HTRA1Q92743 480 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 SMARCAD1Q9H4L7 1026 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 ZNF358Q9NW07 568 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 COMMD8Q9NX08 183 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 TMEM9Q9P0T7 183 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 PARP4Q9UKK3 1724 aaKnown RBP14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 WDR47O94967 919 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 ERBB2P04626 1255 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 HNRNPLP14866 589 aaKnown RBP eCLIP14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 POLD1P28340 1107 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 NPY2RP49146 381 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 CARTPTQ16568 116 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 ATG14Q6ZNE5 492 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 SYTL1Q8IYJ3 562 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 BSNDQ8WZ55 320 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 FIZ1Q96SL8 496 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 CD320Q9NPF0 282 aa14.07□□□□□ -0.16
CLTCL1-201ENST00000412649 TEKT2Q9UIF3 430 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms