RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 PYGMP11217 842 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 LHX1P48742 406 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 MARCKSL1P49006 195 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 SNX16P57768 344 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 PSMC1P62191 440 aaKnown RBP9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 RPL7AP62424 266 aaKnown RBP9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 VSNL1P62760 191 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 CYP1B1Q16678 543 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 GOLGA7BQ2TAP0 167 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 ANO4Q32M45 955 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 FUT11Q495W5 492 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 SEL1L2Q5TEA6 688 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 NUDT18Q6ZVK8 323 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 ARCQ7LC44 396 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 ACOT1Q86TX2 421 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 METTL3Q86U44 580 aaKnown RBP9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 OSTM1Q86WC4 334 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 CACUL1Q86Y37 369 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 CPNE8Q86YQ8 564 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 ZDHHC17Q8IUH5 632 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 SCN4BQ8IWT1 228 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 RHOT1Q8IXI2 618 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 KATNAL2Q8IYT4 538 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 C12orf29Q8N999 325 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 EIF1ADQ8N9N8 165 aaKnown RBP9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 ARHGAP9Q9BRR9 750 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 LRRC1Q9BTT6 524 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 C6orf106Q9H6K1 298 aaPredicted RBP9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 ITPR3Q14573 2671 aa9.82□□□□□ -0.84
SOX9-AS1-201ENST00000412640 ITPR2Q14571 2701 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 FAM170AA1A519 330 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 KRIT1O00522 736 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 ERLIN1O75477 346 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 FAM87AP0C7U9 286 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 KRT3P12035 628 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 LMO2P25791 158 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 OXTRP30559 389 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 PTPN7P35236 360 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 RFC1P35251 1148 aaPredicted RBP9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 GRIA4P48058 902 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 BCAT1P54687 386 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 ERVPABLB-1P60509 514 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 SLC7A9P82251 487 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 OGDHQ02218 1023 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 BST2Q10589 180 aaKnown RBP9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 CCDC142Q17RM4 750 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 LONRF2Q1L5Z9 754 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 C8orf74Q6P047 294 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 DCUN1D2Q6PH85 259 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 POLNQ7Z5Q5 900 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 ADAT2Q7Z6V5 191 aaKnown RBP9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 PHLDB2Q86SQ0 1253 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 TMEM25Q86YD3 366 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 SLC13A5Q86YT5 568 aaPredicted RBP9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 CACTIN-AS1Q8N1I8 211 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 FAM26EQ8N5C1 309 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 B3GALNT2Q8NCR0 500 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 EXD1Q8NHP7 514 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 UBA3Q8TBC4 463 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 EXTL1Q92935 676 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 HSFY1Q96LI6 401 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 MCEEQ96PE7 176 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 DPEP3Q9H4B8 488 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 ASCL3Q9NQ33 180 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 GDF3Q9NR23 364 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 WDR70Q9NW82 654 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 ZNF446Q9NWS9 450 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 STIM2Q9P246 746 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 HESX1Q9UBX0 185 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 TJP2Q9UDY2 1190 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 DSEQ9UL01 958 aa9.81□□□□□ -0.84
SOX9-AS1-201ENST00000412640 GOLGA6L10A0A0M3HER8 536 aa9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 E5RJQ4 531 aa9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 XPO1O14980 1071 aaKnown RBP9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 SART1O43290 800 aaKnown RBP9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 USP12O75317 370 aa9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 GABBR2O75899 941 aa9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 GJB6O95452 261 aa9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 PTPN1P18031 435 aaKnown RBP9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 ACADSBP45954 432 aa9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 PLA2G4AP47712 749 aa9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 TAS2R40P59535 323 aa9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 RNASE9P60153 205 aaKnown RBP9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 COPS2P61201 443 aa9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 PDE4CQ08493 712 aa9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 ZNF211Q13398 564 aaPredicted RBP9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 SHBQ15464 509 aa9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 SIX1Q15475 284 aaPredicted RBP9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 NFE2Q16621 373 aaPredicted RBP9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 BEND6Q5SZJ8 279 aaPredicted RBP9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 GRAMD4Q6IC98 578 aa9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 PMF1Q6P1K2 205 aa9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 TMCO3Q6UWJ1 677 aa9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 OLFML1Q6UWY5 402 aa9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 MAATS1Q7Z4T9 603 aa9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 TMPRSS6Q8IU80 811 aa9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 LSMEM2Q8N112 164 aa9.8□□□□□ -0.84
SOX9-AS1-201ENST00000412640 JOSD2Q8TAC2 188 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms