RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 A0A1W2PQU0 124 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 A0A1W2PR77 199 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 ANKRD62A6NC57 917 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 SIGLEC16A6NMB1 481 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 SMTNL1A8MU46 457 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 TLR4O00206 839 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 ALOX15BO15296 676 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 FLRT2O43155 660 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 CCP110O43303 1012 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 CREB3O43889 395 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 LEFTY1O75610 366 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 ZMPSTE24O75844 475 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 LRIG2O94898 1065 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 PCDH8O95206 1070 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 TRIM16O95361 564 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 ITGAVP06756 1048 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 FERP16591 822 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 PTPN9P43378 593 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 ZNF165P49910 485 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 VASPP50552 380 aaPredicted RBP11.84□□□□□ -0.51
LINC00963-201ENST00000412141 TAS2R38P59533 333 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 ARF5P84085 180 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 STAT4Q14765 748 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 PIP5KL1Q5T9C9 394 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 DCUN1D2Q6PH85 259 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 MON1BQ7L1V2 547 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 STRADAQ7RTN6 431 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 RAB44Q7Z6P3 723 aaPredicted RBP11.84□□□□□ -0.51
LINC00963-201ENST00000412141 SLFN11Q7Z7L1 901 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 PHF13Q86YI8 300 aaPredicted RBP11.84□□□□□ -0.51
LINC00963-201ENST00000412141 C3orf20Q8ND61 904 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 TBC1D31Q96DN5 1066 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 NAP1L5Q96NT1 182 aaPredicted RBP11.84□□□□□ -0.51
LINC00963-201ENST00000412141 ELF4Q99607 663 aaPredicted RBP11.84□□□□□ -0.51
LINC00963-201ENST00000412141 TMEM121BQ9BXQ6 578 aaPredicted RBP11.84□□□□□ -0.51
LINC00963-201ENST00000412141 OSBPL2Q9H1P3 480 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 ZDHHC6Q9H6R6 413 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 FZD3Q9NPG1 666 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 RTN4Q9NQC3 1192 aaKnown RBP11.84□□□□□ -0.51
LINC00963-201ENST00000412141 GDF3Q9NR23 364 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 ARHGAP20Q9P2F6 1191 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 IL36AQ9UHA7 158 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 DAAM1Q9Y4D1 1078 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 PCDHGB2Q9Y5G2 931 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 PLXNA2O75051 1894 aa11.84□□□□□ -0.51
LINC00963-201ENST00000412141 DOCK9Q9BZ29 2069 aa11.83□□□□□ -0.51
LINC00963-201ENST00000412141 DSPP15924 2871 aaKnown RBP11.83□□□□□ -0.52
LINC00963-201ENST00000412141 TMEM131Q92545 1883 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 A0A1B0GTQ1 180 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 LRRC53A6NM62 1247 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 SLC7A4O43246 635 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 ATMINO43313 823 aaPredicted RBP11.83□□□□□ -0.52
LINC00963-201ENST00000412141 LATO43561 262 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 ZNF821O75541 412 aaPredicted RBP11.83□□□□□ -0.52
LINC00963-201ENST00000412141 PRNPP04156 253 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 RHOQP17081 205 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 GRK6P43250 576 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 SERPINH1P50454 418 aaKnown RBP11.83□□□□□ -0.52
LINC00963-201ENST00000412141 CLCN6P51797 869 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 CCNHP51946 323 aaPredicted RBP11.83□□□□□ -0.52
LINC00963-201ENST00000412141 C1QBPQ07021 282 aaKnown RBP11.83□□□□□ -0.52
LINC00963-201ENST00000412141 BNIP3Q12983 259 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 MAPK8IP2Q13387 824 aaPredicted RBP11.83□□□□□ -0.52
LINC00963-201ENST00000412141 ASIC2Q16515 512 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 FILIP1LQ4L180 1135 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 SETMARQ53H47 684 aaPredicted RBP11.83□□□□□ -0.52
LINC00963-201ENST00000412141 SLC45A4Q5BKX6 768 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 CARD16Q5EG05 197 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 ACBD5Q5T8D3 534 aaPredicted RBP11.83□□□□□ -0.52
LINC00963-201ENST00000412141 MANEALQ5VSG8 457 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 SEL1L3Q68CR1 1132 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 NAPEPLDQ6IQ20 393 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 ACAD10Q6JQN1 1059 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 IRF2BP2Q7Z5L9 587 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 MCOLN2Q8IZK6 566 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 EID2Q8N6I1 236 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 TMIEQ8NEW7 156 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 CENPIQ92674 756 aaPredicted RBP11.83□□□□□ -0.52
LINC00963-201ENST00000412141 GATA6Q92908 595 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 ARHGEF2Q92974 986 aaKnown RBP11.83□□□□□ -0.52
LINC00963-201ENST00000412141 CDC6Q99741 560 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 CAAP1Q9H8G2 361 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 TMEM51Q9NW97 253 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 GPATCH2LQ9NWQ4 482 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 HECAQ9UBI9 543 aaPredicted RBP11.83□□□□□ -0.52
LINC00963-201ENST00000412141 PPARGC1AQ9UBK2 798 aaKnown RBP11.83□□□□□ -0.52
LINC00963-201ENST00000412141 ZMIZ1Q9ULJ6 1067 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 MSRB2Q9Y3D2 182 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 NEUROG3Q9Y4Z2 214 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 PKD1L2Q7Z442 2459 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 FREM2Q5SZK8 3169 aa11.83□□□□□ -0.52
LINC00963-201ENST00000412141 KRIT1O00522 736 aa11.82□□□□□ -0.52
LINC00963-201ENST00000412141 BUB1O43683 1085 aa11.82□□□□□ -0.52
LINC00963-201ENST00000412141 RAMP2O60895 175 aa11.82□□□□□ -0.52
LINC00963-201ENST00000412141 SDC3O75056 442 aa11.82□□□□□ -0.52
LINC00963-201ENST00000412141 SERPINC1P01008 464 aa11.82□□□□□ -0.52
LINC00963-201ENST00000412141 CCDC172P0C7W6 258 aa11.82□□□□□ -0.52
LINC00963-201ENST00000412141 SKILP12757 684 aa11.82□□□□□ -0.52
LINC00963-201ENST00000412141 EPHB2P29323 1055 aa11.82□□□□□ -0.52
LINC00963-201ENST00000412141 ZNF143P52747 638 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms