RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 WFDC5Q8TCV5 224 aa14.31□□□□□ -0.12
GPNMB-203ENST00000409458 NSMCE1Q8WV22 266 aa14.31□□□□□ -0.12
GPNMB-203ENST00000409458 ING5Q8WYH8 240 aa14.31□□□□□ -0.12
GPNMB-203ENST00000409458 USP13Q92995 863 aaPredicted RBP14.31□□□□□ -0.12
GPNMB-203ENST00000409458 BHMTQ93088 406 aa14.31□□□□□ -0.12
GPNMB-203ENST00000409458 XPO6Q96QU8 1125 aaKnown RBP14.31□□□□□ -0.12
GPNMB-203ENST00000409458 CCDC77Q9BR77 488 aa14.31□□□□□ -0.12
GPNMB-203ENST00000409458 SPON2Q9BUD6 331 aa14.31□□□□□ -0.12
GPNMB-203ENST00000409458 ACSS3Q9H6R3 686 aa14.31□□□□□ -0.12
GPNMB-203ENST00000409458 EURLQ9NYK6 297 aa14.31□□□□□ -0.12
GPNMB-203ENST00000409458 C2orf16Q68DN1 1984 aa14.31□□□□□ -0.12
GPNMB-203ENST00000409458 CEP290O15078 2479 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 MYLKQ15746 1914 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 TCRBV9S1A1TA0A576 114 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 TYW5A2RUC4 315 aaKnown RBP14.3□□□□□ -0.12
GPNMB-203ENST00000409458 POC1B-GALNT4F8VUJ3 575 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 H0Y626 953 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 RFXAPO00287 272 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 PIAS1O75925 651 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 ANXA9O76027 345 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 OXCT1P55809 520 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 MAGOHP61326 146 aaKnown RBP14.3□□□□□ -0.12
GPNMB-203ENST00000409458 NIPAL4Q0D2K0 466 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 TNFAIP8L3Q5GJ75 292 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 RNF219Q5W0B1 726 aaPredicted RBP14.3□□□□□ -0.12
GPNMB-203ENST00000409458 ELMSAN1Q6PJG2 1045 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 UNC5AQ6ZN44 842 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 TDRD5Q8NAT2 981 aaKnown RBP14.3□□□□□ -0.12
GPNMB-203ENST00000409458 SMG7Q92540 1137 aaKnown RBP14.3□□□□□ -0.12
GPNMB-203ENST00000409458 TMA16Q96EY4 203 aaKnown RBP14.3□□□□□ -0.12
GPNMB-203ENST00000409458 STAMBPL1Q96FJ0 436 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 TBL1YQ9BQ87 522 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 ACE2Q9BYF1 805 aaPredicted RBP14.3□□□□□ -0.12
GPNMB-203ENST00000409458 SLC25A51Q9H1U9 297 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 SLC28A3Q9HAS3 691 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 ATP13A1Q9HD20 1204 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 LGALS13Q9UHV8 139 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 AAR2Q9Y312 384 aaKnown RBP14.3□□□□□ -0.12
GPNMB-203ENST00000409458 NUP210Q8TEM1 1887 aaPredicted RBP14.3□□□□□ -0.12
GPNMB-203ENST00000409458 TTC24A2A3L6 582 aaPredicted RBP14.3□□□□□ -0.12
GPNMB-203ENST00000409458 SDR42E2A6NKP2 422 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 MUSKO15146 869 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 PSMD3O43242 534 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 KDELR3O43731 214 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 CDH16O75309 829 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 SPAG6O75602 509 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 GJB3O75712 270 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 MMP2P08253 660 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 NR1D1P20393 614 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 GEMP55040 296 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 DSC2Q02487 901 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 KLHL38Q2WGJ6 581 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 STEAP4Q687X5 459 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 NAPEPLDQ6IQ20 393 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 CASC4Q6P4E1 433 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 ZNF783Q6ZMS7 281 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 PRPF39Q86UA1 669 aaKnown RBP14.3□□□□□ -0.12
GPNMB-203ENST00000409458 DNAAF3Q8N9W5 541 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 IPMKQ8NFU5 416 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 IMP4Q96G21 291 aaKnown RBP14.3□□□□□ -0.12
GPNMB-203ENST00000409458 PKNOX2Q96KN3 472 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 ZSWIM3Q96MP5 696 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 ZNF599Q96NL3 588 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 PPP1R2P1Q96PQ5 205 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 FICDQ9BVA6 458 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 MUC3BQ9H195 1237 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 PIDD1Q9HB75 910 aa14.3□□□□□ -0.12
GPNMB-203ENST00000409458 MIA3Q5JRA6 1907 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 E2F8A0AVK6 867 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 SOBPA7XYQ1 873 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 PMPCBO75439 489 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 AGTP01019 485 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 C1QAP02745 245 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 MZF1P28698 734 aaPredicted RBP14.29□□□□□ -0.12
GPNMB-203ENST00000409458 HPDP32754 393 aaPredicted RBP14.29□□□□□ -0.12
GPNMB-203ENST00000409458 STX2P32856 288 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 ADRA1AP35348 466 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 CSKP41240 450 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 CD86P42081 329 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 ARF5P84085 180 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 ITKQ08881 620 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 USP4Q13107 963 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 CDH18Q13634 790 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 KCNC3Q14003 757 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 ZNF235Q14590 738 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 IHHQ14623 411 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 TMED2Q15363 201 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 ZNF77Q15935 545 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 KDELC1Q6UW63 502 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 TMC5Q6UXY8 1006 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 TPGS1Q6ZTW0 290 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 TDRPQ86YL5 185 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 MFN1Q8IWA4 741 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 CYP4X1Q8N118 509 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 GSDMBQ8TAX9 411 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 ITFG1Q8TB96 612 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 DDI1Q8WTU0 396 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 MRRFQ96E11 262 aaKnown RBP14.29□□□□□ -0.12
GPNMB-203ENST00000409458 MRGPRX2Q96LB1 330 aa14.29□□□□□ -0.12
GPNMB-203ENST00000409458 SFXN1Q9H9B4 322 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms