RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 PATL1Q86TB9 770 aaKnown RBP5.64□□□□□ -1.51
CLK1-202ENST00000409403 VPS36Q86VN1 386 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 DZIP1Q86YF9 867 aaKnown RBP5.64□□□□□ -1.51
CLK1-202ENST00000409403 LURAP1LQ8IV03 231 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 RHOT1Q8IXI2 618 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 CARFQ8N187 725 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 RIBC1Q8N443 379 aaPredicted RBP5.64□□□□□ -1.51
CLK1-202ENST00000409403 SPATA5Q8NB90 893 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 PLA2G15Q8NCC3 412 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 GIMAP8Q8ND71 665 aaPredicted RBP5.64□□□□□ -1.51
CLK1-202ENST00000409403 DEPTORQ8TB45 409 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 ZNF480Q8WV37 535 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 KAT5Q92993 513 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 PHKBQ93100 1093 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 MCUR1Q96AQ8 359 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 DACT3Q96B18 629 aaPredicted RBP5.64□□□□□ -1.51
CLK1-202ENST00000409403 ERP27Q96DN0 273 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 EPSTI1Q96J88 318 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 HNRNPABQ99729 332 aaKnown RBP5.64□□□□□ -1.51
CLK1-202ENST00000409403 LBHD1Q9BQE6 289 aaPredicted RBP5.64□□□□□ -1.51
CLK1-202ENST00000409403 PITPNM3Q9BZ71 974 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 KIAA1683Q9H0B3 1180 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 DDX47Q9H0S4 455 aaKnown RBP5.64□□□□□ -1.51
CLK1-202ENST00000409403 MYLK2Q9H1R3 596 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 OR10A2Q9H208 303 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 VPS33BQ9H267 617 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 Q9H521 79 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 DBNDD1Q9H9R9 158 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 PARVBQ9HBI1 364 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 GJB4Q9NTQ9 266 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.64□□□□□ -1.51
CLK1-202ENST00000409403 ADAM29Q9UKF5 820 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 DMTF1Q9Y222 760 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 COL1A1P02452 1464 aaPredicted RBP5.64□□□□□ -1.51
CLK1-202ENST00000409403 FLNBO75369 2602 aaKnown RBP5.64□□□□□ -1.51
CLK1-202ENST00000409403 NUP98P52948 1817 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 DOCK3Q8IZD9 2030 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 FAM186AA6NE01 2351 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 GCN1Q92616 2671 aaKnown RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 DMXL1Q9Y485 3027 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 TMEM120BA0PK00 339 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 SPECC1L-ADORA2AF8WAN1 911 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 H0Y3Z8 333 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 GOLGA8TH3BQL2 631 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 FFAR3O14843 346 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 CYTH3O43739 400 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 UBXN7O94888 489 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 GGPS1O95749 300 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 TSPAN15O95858 294 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 ALDH2P05091 517 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 ZNF888P0CJ79 500 aaPredicted RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 GOLGA8HP0CJ92 632 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 RARGP13631 454 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 RPS12P25398 132 aaKnown RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 CSF2RBP32927 897 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 TXKP42681 527 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 SLC1A4P43007 532 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 RRADP55042 308 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 GEMIN4P57678 1058 aaKnown RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 DR1Q01658 176 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 TFCP2Q12800 502 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 GIT2Q14161 759 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 GALEQ14376 348 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 NONOQ15233 471 aaKnown RBP eCLIP5.63□□□□□ -1.51
CLK1-202ENST00000409403 ZMAT1Q5H9K5 638 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 AGBL4Q5VU57 503 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 DUPD1Q68J44 220 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 RGS9BPQ6ZS82 235 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 Q6ZVL8 140 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 OVCH2Q7RTZ1 564 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 NANOGNBQ7Z5D8 188 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 ADGRG6Q86SQ4 1221 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 TTC7BQ86TV6 843 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 ECHDC2Q86YB7 292 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 EXOC8Q8IYI6 725 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 ANKRD35Q8N283 1001 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 SRBD1Q8N5C6 995 aaKnown RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 TXNDC5Q8NBS9 432 aaKnown RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 BHLHE22Q8NFJ8 381 aaPredicted RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 PPP1R35Q8TAP8 253 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 FNDC8Q8TC99 324 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 DDI1Q8WTU0 396 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 BRI3BPQ8WY22 251 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 ATP6V0A1Q93050 837 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 CCDC77Q9BR77 488 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 ERP44Q9BS26 406 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 MAK16Q9BXY0 300 aaKnown RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 RNF26Q9BY78 433 aaPredicted RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 NT5C3AQ9H0P0 336 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 DENND2DQ9H6A0 471 aaPredicted RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 UBN1Q9NPG3 1134 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 KMT5AQ9NQR1 393 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 TLR9Q9NR96 1032 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 ETNK2Q9NVF9 386 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 ZDHHC7Q9NXF8 308 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 NDE1Q9NXR1 346 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 DKK3Q9UBP4 350 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 FAF1Q9UNN5 650 aaPredicted RBP5.63□□□□□ -1.51
CLK1-202ENST00000409403 SIK3Q9Y2K2 1263 aa5.63□□□□□ -1.51
CLK1-202ENST00000409403 HBS1LQ9Y450 684 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms