RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 TEX26Q8N6G2 289 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 ZNF599Q96NL3 588 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 GBA3Q9H227 469 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 DNAJC17Q9NVM6 304 aaKnown RBP17.15■□□□□ 0.34
SSB-202ENST00000409333 IGSF9Q9P2J2 1179 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 UBA2Q9UBT2 640 aaPredicted RBP17.15■□□□□ 0.34
SSB-202ENST00000409333 RSPH14Q9UHP6 348 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 FBXO10Q9UK96 956 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 COL6A3P12111 3177 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 MUC22E2RYF6 1773 aaPredicted RBP17.15■□□□□ 0.34
SSB-202ENST00000409333 ARNTLO00327 626 aa17.14■□□□□ 0.33
SSB-202ENST00000409333 CD160O95971 181 aa17.14■□□□□ 0.33
SSB-202ENST00000409333 TUBBP07437 444 aa17.14■□□□□ 0.33
SSB-202ENST00000409333 PABPC1P11940 636 aaKnown RBP17.14■□□□□ 0.33
SSB-202ENST00000409333 PLK1P53350 603 aa17.14■□□□□ 0.33
SSB-202ENST00000409333 MAXP61244 160 aa17.14■□□□□ 0.33
SSB-202ENST00000409333 SLC12A1Q13621 1099 aa17.14■□□□□ 0.33
SSB-202ENST00000409333 KCNJ11Q14654 390 aa17.14■□□□□ 0.33
SSB-202ENST00000409333 C4orf22Q6V702 233 aa17.14■□□□□ 0.33
SSB-202ENST00000409333 ETFBKMTQ8IXQ9 262 aa17.14■□□□□ 0.33
SSB-202ENST00000409333 PGBD5Q8N414 524 aa17.14■□□□□ 0.33
SSB-202ENST00000409333 CPA6Q8N4T0 437 aa17.14■□□□□ 0.33
SSB-202ENST00000409333 ZNF557Q8N988 423 aaPredicted RBP17.14■□□□□ 0.33
SSB-202ENST00000409333 XPO6Q96QU8 1125 aaKnown RBP17.14■□□□□ 0.33
SSB-202ENST00000409333 C2orf49Q9BVC5 232 aaPredicted RBP17.14■□□□□ 0.33
SSB-202ENST00000409333 PHF7Q9BWX1 381 aaPredicted RBP17.14■□□□□ 0.33
SSB-202ENST00000409333 SLC2A11Q9BYW1 496 aa17.14■□□□□ 0.33
SSB-202ENST00000409333 NT5MQ9NPB1 228 aa17.14■□□□□ 0.33
SSB-202ENST00000409333 ANAPC5Q9UJX4 755 aa17.14■□□□□ 0.33
SSB-202ENST00000409333 TULP3O75386 442 aa17.13■□□□□ 0.33
SSB-202ENST00000409333 NEBLO76041 1014 aa17.13■□□□□ 0.33
SSB-202ENST00000409333 TMEM63AO94886 807 aa17.13■□□□□ 0.33
SSB-202ENST00000409333 CTSOP43234 321 aaPredicted RBP17.13■□□□□ 0.33
SSB-202ENST00000409333 SLC6A11P48066 632 aa17.13■□□□□ 0.33
SSB-202ENST00000409333 DGKGP49619 791 aa17.13■□□□□ 0.33
SSB-202ENST00000409333 GEN1Q17RS7 908 aa17.13■□□□□ 0.33
SSB-202ENST00000409333 AAK1Q2M2I8 961 aa17.13■□□□□ 0.33
SSB-202ENST00000409333 PARP6Q2NL67 630 aa17.13■□□□□ 0.33
SSB-202ENST00000409333 LEXMQ3ZCV2 418 aa17.13■□□□□ 0.33
SSB-202ENST00000409333 ITPRIPL1Q6GPH6 555 aa17.13■□□□□ 0.33
SSB-202ENST00000409333 PPIL6Q8IXY8 311 aa17.13■□□□□ 0.33
SSB-202ENST00000409333 NAT8LQ8N9F0 302 aa17.13■□□□□ 0.33
SSB-202ENST00000409333 BBOF1Q8ND07 529 aa17.13■□□□□ 0.33
SSB-202ENST00000409333 PRCCQ92733 491 aaPredicted RBP17.13■□□□□ 0.33
SSB-202ENST00000409333 ATP8A1Q9Y2Q0 1164 aa17.13■□□□□ 0.33
SSB-202ENST00000409333 ATG2BQ96BY7 2078 aa17.13■□□□□ 0.33
SSB-202ENST00000409333 TCF20Q9UGU0 1960 aaKnown RBP17.13■□□□□ 0.33
SSB-202ENST00000409333 MUSKO15146 869 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 MT-CO1P00395 513 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 FAM153BP0C7A2 387 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 CISD3P0C7P0 127 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 FDFT1P37268 417 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 TFF2Q03403 129 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 MESP2Q0VG99 397 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 SEMA5AQ13591 1074 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 ZNF235Q14590 738 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 FAM153CQ494X1 144 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 TMEM215Q68D42 235 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 NAIF1Q69YI7 327 aaPredicted RBP17.12■□□□□ 0.33
SSB-202ENST00000409333 KIAA0907Q7Z7F0 614 aaPredicted RBP17.12■□□□□ 0.33
SSB-202ENST00000409333 PCGF5Q86SE9 256 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 ADIPOR2Q86V24 386 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.12■□□□□ 0.33
SSB-202ENST00000409333 TSEN2Q8NCE0 465 aaKnown RBP17.12■□□□□ 0.33
SSB-202ENST00000409333 ACDQ96AP0 544 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 CHFRQ96EP1 664 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 PWWP2AQ96N64 755 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 GLOD4Q9HC38 313 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 LIMD1Q9UGP4 676 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 FAM153AQ9UHL3 310 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 TTC24A2A3L6 582 aaPredicted RBP17.12■□□□□ 0.33
SSB-202ENST00000409333 GOLGA8MH3BSY2 632 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 GJB3O75712 270 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 APRTP07741 180 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 GJA4P35212 333 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 ITKQ08881 620 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 MORF4L2Q15014 288 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 CYTH1Q15438 398 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 PTCRAQ6ISU1 281 aaPredicted RBP17.12■□□□□ 0.33
SSB-202ENST00000409333 FBXO38Q6PIJ6 1188 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 EIF1ADQ8N9N8 165 aaKnown RBP17.12■□□□□ 0.33
SSB-202ENST00000409333 SPATA22Q8NHS9 363 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 MLPHQ9BV36 600 aaPredicted RBP17.12■□□□□ 0.33
SSB-202ENST00000409333 CINPQ9BW66 212 aaPredicted RBP17.12■□□□□ 0.33
SSB-202ENST00000409333 BRD9Q9H8M2 597 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 PRDM6Q9NQX0 595 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 SHOC2Q9UQ13 582 aa17.12■□□□□ 0.33
SSB-202ENST00000409333 CCDC151A5D8V7 595 aa17.11■□□□□ 0.33
SSB-202ENST00000409333 K7ERQ8 282 aa17.11■□□□□ 0.33
SSB-202ENST00000409333 TMCC1O94876 653 aa17.11■□□□□ 0.33
SSB-202ENST00000409333 H2AFXP16104 143 aaPredicted RBP17.11■□□□□ 0.33
SSB-202ENST00000409333 OPRD1P41143 372 aa17.11■□□□□ 0.33
SSB-202ENST00000409333 STK19P49842 368 aaPredicted RBP17.11■□□□□ 0.33
SSB-202ENST00000409333 KDSRQ06136 332 aa17.11■□□□□ 0.33
SSB-202ENST00000409333 NR1H3Q13133 447 aa17.11■□□□□ 0.33
SSB-202ENST00000409333 RFTN1Q14699 578 aaPredicted RBP17.11■□□□□ 0.33
SSB-202ENST00000409333 BRD3Q15059 726 aa17.11■□□□□ 0.33
SSB-202ENST00000409333 RETSATQ6NUM9 610 aa17.11■□□□□ 0.33
SSB-202ENST00000409333 HOOK3Q86VS8 718 aa17.11■□□□□ 0.33
SSB-202ENST00000409333 AHI1Q8N157 1196 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms